Gene PSPTO_0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0696 
SymbolribA 
ID1182316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp749113 
End bp749778 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content60% 
IMG OID637392071 
ProductGTP cyclohydrolase II 
Protein accessionNP_790543 
Protein GI28867924 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCT TGCGAATTTC CAGTCTTCAT ACTGATCAGG AGCACACGGT GCCCGTCGTA 
TTTGTCGCCG CTTCCAAACT GCCCACACCC TTTGCAGAAT TTGCCATGCA CGGCTTTATC
GAGTCAGCAA CCGGCCGTGA ACACGTTGTC CTGAGCCTGG GCGATGTAGC GGATGGCGCT
CCGGTTCTTG GCCGGGTGCA CTCCGAATGC CTGACCGGTG ATGCACTGTT CAGTCAGCGT
TGCGATTGCG GCTCTCAACT GGAAGCCGCC ATGCGCGCCA TTGCTACCGA GGGGCGCGGC
GTATTGCTGT ATCTGCGTCA GGAAGGGCGC GGCATCGGCC TGATGAACAA GATCCGCGCC
TACGAGCTGC AGGACGGCGG GGCCGATACG GTCGAAGCCA ACGAGCGTCT TGGTTTTGCC
GCCGACCAGC GCGACTACGC CATCTGCCTG CCGATGCTTC AGCATCTGGG TGTGCAGTCG
CTGCGCTTGA TGACCAACAA CCCGCGTAAA GTCAAAGCGC TGACCGACAT GGGCATCAAT
GTCGCCGAGC GTGTGCCGCT GCACACTGGG CAAAACCCGC ACAATCGCCT TTATCTGGCG
ACCAAGGCCG GCAAGTTGGG GCACATGATG GGTAACGAAC ACCAAAGCGA GGTCGGCCCC
GCGTGA
 
Protein sequence
MQILRISSLH TDQEHTVPVV FVAASKLPTP FAEFAMHGFI ESATGREHVV LSLGDVADGA 
PVLGRVHSEC LTGDALFSQR CDCGSQLEAA MRAIATEGRG VLLYLRQEGR GIGLMNKIRA
YELQDGGADT VEANERLGFA ADQRDYAICL PMLQHLGVQS LRLMTNNPRK VKALTDMGIN
VAERVPLHTG QNPHNRLYLA TKAGKLGHMM GNEHQSEVGP A