Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0696 |
Symbol | ribA |
ID | 1182316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 749113 |
End bp | 749778 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392071 |
Product | GTP cyclohydrolase II |
Protein accession | NP_790543 |
Protein GI | 28867924 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0807] GTP cyclohydrolase II |
TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCT TGCGAATTTC CAGTCTTCAT ACTGATCAGG AGCACACGGT GCCCGTCGTA TTTGTCGCCG CTTCCAAACT GCCCACACCC TTTGCAGAAT TTGCCATGCA CGGCTTTATC GAGTCAGCAA CCGGCCGTGA ACACGTTGTC CTGAGCCTGG GCGATGTAGC GGATGGCGCT CCGGTTCTTG GCCGGGTGCA CTCCGAATGC CTGACCGGTG ATGCACTGTT CAGTCAGCGT TGCGATTGCG GCTCTCAACT GGAAGCCGCC ATGCGCGCCA TTGCTACCGA GGGGCGCGGC GTATTGCTGT ATCTGCGTCA GGAAGGGCGC GGCATCGGCC TGATGAACAA GATCCGCGCC TACGAGCTGC AGGACGGCGG GGCCGATACG GTCGAAGCCA ACGAGCGTCT TGGTTTTGCC GCCGACCAGC GCGACTACGC CATCTGCCTG CCGATGCTTC AGCATCTGGG TGTGCAGTCG CTGCGCTTGA TGACCAACAA CCCGCGTAAA GTCAAAGCGC TGACCGACAT GGGCATCAAT GTCGCCGAGC GTGTGCCGCT GCACACTGGG CAAAACCCGC ACAATCGCCT TTATCTGGCG ACCAAGGCCG GCAAGTTGGG GCACATGATG GGTAACGAAC ACCAAAGCGA GGTCGGCCCC GCGTGA
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Protein sequence | MQILRISSLH TDQEHTVPVV FVAASKLPTP FAEFAMHGFI ESATGREHVV LSLGDVADGA PVLGRVHSEC LTGDALFSQR CDCGSQLEAA MRAIATEGRG VLLYLRQEGR GIGLMNKIRA YELQDGGADT VEANERLGFA ADQRDYAICL PMLQHLGVQS LRLMTNNPRK VKALTDMGIN VAERVPLHTG QNPHNRLYLA TKAGKLGHMM GNEHQSEVGP A
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