Gene PSPTO_0693 details

Gene Information

• Locus tag: PSPTO_0693
• Symbol: ribH-1
• ID: 1182313
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 747074
• End bp: 747550
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637392068
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: NP_790540
• Protein GI: 28867921
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTTGA AGACCATCGA AGGTACCTTC ATCGCCCCCC AAGGCCGCTA CGCCTTGGTG 
GTTGGCCGTT TCAACAGCTT CGTCGTGGAA AGCCTGGTTA GCGGTGCCGT TGATGCGCTG 
GTACGCCACG GCGTGAGCGA AAGCGATATC ACCATCATCC GTGCGCCGGG TGCGTTCGAG 
ATTCCACTGG TCGTGCAGAA AGTTGCTCAA CGCAGCGAGT TCGCGGCCAT CGTTGCACTG 
GGTGCAGTGA TCCGTGGCGG TACTCCGCAC TTCGAATACG TGGCAGGCGA GTGCGTCAAA 
GGCTTGTCCC AGGTTTCCAT GGAATTCGGC GTTCCGGTCG CTTTCGGCGT ATTGACTGTC 
GATTCCATCG AGCAGGCCAT CGAGCGCTCC GGCACCAAGG CCGGCAACAA GGGCGCTGAA 
GCTGCCCTGT CCGCCATCGA AATGGTCAGC CTGCTGTCGC AGTTGGAGGC CAAGTGA 

 

Protein sequence

MTLKTIEGTF IAPQGRYALV VGRFNSFVVE SLVSGAVDAL VRHGVSESDI TIIRAPGAFE 
IPLVVQKVAQ RSEFAAIVAL GAVIRGGTPH FEYVAGECVK GLSQVSMEFG VPVAFGVLTV 
DSIEQAIERS GTKAGNKGAE AALSAIEMVS LLSQLEAK