Gene PSPTO_0691 details

Gene Information

• Locus tag: PSPTO_0691
• Symbol: ribE
• ID: 1182311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 745174
• End bp: 745836
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637392066
• Product: riboflavin synthase, alpha subunit
• Protein accession: NP_790538
• Protein GI: 28867919
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0307] Riboflavin synthase alpha chain
• TIGRFAM ID: [TIGR00187] riboflavin synthase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTACTG GCATCATCGA ATCCATCGGC AGCATCCGCG CCCTGACTCC CAAGGGTGGC 
GACGTCCGCG TTTACGTGGA AACCGGCAAG CTCGACCTGA GCGACGTCAA ACTCGGCGAC 
AGCATTGCCG TCAATGGCGT ATGCCTGACC GCTGTCGAAT TGCCCGGCGA CGGCTTCTGG 
GCTGACGTCA GTCGTGAAAC CCTGACCGTG ACTGCCTTTG TCGATTTGAA GAGCGGCAGC 
CGGGTCAATC TGGAAAAAGC CCTGACGCCG ACCACGCGTC TTGGCGGTCA CCTGGTCAGC 
GGCCATGTCG ACGGCGTCGG TGAAATCGTC GCCCGTGCCG ATAACGCCCG CGCCATCCAG 
TTTACGGTGC GTGCGCCGCG CGAGCTGGCC AAATACATCG CCCATAAAGG CTCGATCACC 
GTTGACGGCA CCAGCCTGAC GGTCAACTCG GTCAATGGCG CCGAGTTCGA ACTGACCATC 
GTGCCGCACA CCCTCAGCGA AACCATCATG GCCGACTACC TGCCTGGCCG TAAGGTCAAC 
CTGGAAGTGG ACCTGCTGGC GCGCTATCTG GAGCGTCTGT TGCTGGGCGA CAAGGCAGCA 
GAACCGGGTC ACGGCACGAT CACCGAAAGC TTTCTGGCCG AGACCGGCTA CCTCAAATCC 
TGA 

 

Protein sequence

MFTGIIESIG SIRALTPKGG DVRVYVETGK LDLSDVKLGD SIAVNGVCLT AVELPGDGFW 
ADVSRETLTV TAFVDLKSGS RVNLEKALTP TTRLGGHLVS GHVDGVGEIV ARADNARAIQ 
FTVRAPRELA KYIAHKGSIT VDGTSLTVNS VNGAEFELTI VPHTLSETIM ADYLPGRKVN 
LEVDLLARYL ERLLLGDKAA EPGHGTITES FLAETGYLKS