Gene PSPTO_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0689 
Symbol 
ID1182309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp743520 
End bp743984 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID637392064 
Producthypothetical protein 
Protein accessionNP_790536 
Protein GI28867917 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACTGTC CCTTCTGCGG TGCCAATGAC ACCAAAGTCA TCGACTCCCG CCTCGTCGCC 
GAAGGCGAGC AAGTACGCCG CCGCCGCGAA TGCCTGGCCT GCGGCGAGCG CTTCACGACG 
TTTGAAACCG CCGAGCTGGT CTTGCCGCGC CTGATCAAGC AGGACGGCAG TCGCCAGCCG 
TTCGACGAAG AAAAGCTGCG CGCCGGCATG CAGCGCGCCC TTGAAAAGCG CCCGGTGAGT 
GTCGAACGCC TTGAAGCTGC ACTGGCCCAC ATCAAGCACA AGCTACGGGC CACGGGTGAG 
CGCGAGGTCA AGTCGCTGGT GGTCGGCGAG CTGGTCATGG GCGAGCTGCA AAAGCTGGAT 
GAAGTGGCCT ATATTCGCTT CGCGTCCGTG TATCGCCGCT TTCAGGACCT CAACGAGTTT 
CGTGAAGAAA TCGACCGTCT GGCCCGCGAG CCGGGTAAGG AATGA
 
Protein sequence
MHCPFCGAND TKVIDSRLVA EGEQVRRRRE CLACGERFTT FETAELVLPR LIKQDGSRQP 
FDEEKLRAGM QRALEKRPVS VERLEAALAH IKHKLRATGE REVKSLVVGE LVMGELQKLD 
EVAYIRFASV YRRFQDLNEF REEIDRLARE PGKE