| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0686 |
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| Symbol | trx-1 |
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| ID | 1182306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 741199 |
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| End bp | 742071 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392061 |
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| Product | thioredoxin |
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| Protein accession | NP_790533 |
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| Protein GI | 28867914 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGG AAACTGCTTA CATCTTCGAC GCAACCAGCG CGAACTTTGA CCAACAGGTG
ATCGACAAAT CATTCGATCA GCCTGTCCTC GTTGATTTCT GGGCCGAGTG GTGTGCGCCC
TGCAAGGTCC TGATGCCGCT GTTGCAGCAG ATCACCGAAA GCTATCAGGG CGAGTTGCTG
CTGGCCAAGG TCAATTGCGA CGCCGAGCCG GATGTTGTCT CCCGCTTCGG TATTCGCAGC
CTGCCGACCG TGGTGCTTTT CAAGGACGGC CAGCCGGTGG ATGGCTTTGC CGGTGCGCAG
CCCGAGTCGG AAATCCGTAA GATTCTTGAA CAACATGTCG TCATGCCACC GCCCCCGGCG
GCTGACCCGC TCAAGCAGGC GCAGGCATTG TTTGCCGAAA GCCGATTCTC CGAGGCCGAG
GCGGTTCTCA AGCAACTGCT GGGCGAAGAC AACACTAACG CAGCCGCGCT GATTCTGTAT
GCGCGCTGCC TGGCCGAGCG TGGCGAGTTG AGTGAAGCCC GCGCTGTGCT CGATGCAGTT
ACCGGCGATG CACATAAAGC CGAACTGGCC GGTGCCAAGG CGCAACTGAC TTTTCTGGCT
GAAGCCGCCA CCCTGCCGGA TGCTGCCGAG CTGAAAAGCC GTCTGGCGCA AAACCCTCAG
GATGACGAAG CCGCGCATCA ACTGGCGATT CAGCAGTTGT CGCGTCAACA GTACGAAGCC
GCACTTGATG GCCTGCTCAA GCTGTTCATC CGCAACCGCA ACTACGCCGA AGGCCTGCCG
CACAAGACGC TGCTGCAAGT GTTCGACCTG CTGGGCAATG ACCATCCATT GGTGACGGCG
TATCGCCGCA AGCTGTTTGC TGCGCTGTAT TAA
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| Protein sequence | MSQETAYIFD ATSANFDQQV IDKSFDQPVL VDFWAEWCAP CKVLMPLLQQ ITESYQGELL
LAKVNCDAEP DVVSRFGIRS LPTVVLFKDG QPVDGFAGAQ PESEIRKILE QHVVMPPPPA
ADPLKQAQAL FAESRFSEAE AVLKQLLGED NTNAAALILY ARCLAERGEL SEARAVLDAV
TGDAHKAELA GAKAQLTFLA EAATLPDAAE LKSRLAQNPQ DDEAAHQLAI QQLSRQQYEA
ALDGLLKLFI RNRNYAEGLP HKTLLQVFDL LGNDHPLVTA YRRKLFAALY
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