| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0678 |
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| Symbol | |
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| ID | 1182298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 734929 |
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| End bp | 735858 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392053 |
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| Product | NAD-dependent epimerase/dehydratase family protein |
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| Protein accession | NP_790525 |
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| Protein GI | 28867906 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACG CTCCTGTTCT GATCACTGGA GGTGCGGGTT TCATCGGCTC GCACCTGACC
GACGCATTGC TCGCCAGCGG GCACAGCGTG CGCATCCTCG ACAACCTTTC GGCGGGCAAG
CGCAGCAACC TGCCGCTGGA CAATCCACGG GTTGAACTGA TCGAAGGCGA TGTGGCCGAT
GCCGAACTGG TCAAGCGTGT GGCGCAGGGC TGCAAGGCGG TCGTTCATCT GGCGGCGGTG
GCCTCGGTGC AGGCGTCAGT CGATGACCCG GTGCGCACCC ATCAAAGCAA TTTCATCGGC
ACGCTGAATG TCTGCGAAGC GATGCGCGAG GCGGGTATCA AGCGGGTGAT CTTCGCGTCC
AGCGCAGCGG TTTACGGCAA CAATGGCGAA GGCGAAGCGA TCACCGAAGA CACCACCAAA
GCACCGCTGA CCCCTTATGC TTCGGACAAA CTGGCCAGCG AGTTCTACCT GGACTTCTAC
CGCCGCCAGC ATGGCCTGGA GCCGGTGATC TTTCGCTTCT TCAACATCTT CGGCCCGCGC
CAGGACCCGT CGTCGCCGTA TTCCGGCGTC ATCAGCATCT TTGCCGAGCG CCTCCAGAAC
GGCTTGCCGA TCCTCGTGTT TGGCGATGGC GAGCAGACAC GCGATTTCTT CTACGTGGGC
GATCTGCTCA AGCTGCTGTT GCAGGCTCTG TCACGAGACA GCGCCATCGA AGGCGCGATC
AACGTCGGAT TGAACAACAC CACCTCGCTC AATGAACTGT TGTCGGCACT GTCGCACGTG
GTTGGCAAAC AGCCGCAAGT CACCTACCAG GCGCCACGTT CGGGAGACAT CAAACACTCC
CGCGCCAGTA ATCGGCGACT GCTGGAACAC TTCACCCTCG ATGAAGTCAC TCCCTTGAAG
CGCGGGCTTG AGTTGCTGAT AGGGCAGTGA
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| Protein sequence | MSDAPVLITG GAGFIGSHLT DALLASGHSV RILDNLSAGK RSNLPLDNPR VELIEGDVAD
AELVKRVAQG CKAVVHLAAV ASVQASVDDP VRTHQSNFIG TLNVCEAMRE AGIKRVIFAS
SAAVYGNNGE GEAITEDTTK APLTPYASDK LASEFYLDFY RRQHGLEPVI FRFFNIFGPR
QDPSSPYSGV ISIFAERLQN GLPILVFGDG EQTRDFFYVG DLLKLLLQAL SRDSAIEGAI
NVGLNNTTSL NELLSALSHV VGKQPQVTYQ APRSGDIKHS RASNRRLLEH FTLDEVTPLK
RGLELLIGQ
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