| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0676 |
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| Symbol | |
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| ID | 1182296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 731587 |
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| End bp | 733890 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392051 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | NP_790523 |
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| Protein GI | 28867904 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGTCTC AGCTGAAAAT CCTGATCCTG TCGGGTCTGT TGTTATTGGC AGGCAGTTTC
AATCTTCAAG CGGCCGATGT TCCTGCACTG CCCATGGGCG CCGCGGTGCC AGCCGATGAC
AAGGCGGCCG ACAAGGCCGA TGGCAAGGCT GCTGACAAAG CAGCGGCCAA GCCGGATGAA
AAGTCCGCCG AAAAAACCGA TGCCAAATCA GACGCTGCTG CCGACCCTGC TGCAGCCGAT
CCGGCCGCCG AGCTTCTGGT GCAAGGCGGT TTGCTTGGGG CTATCAGCTC CAGCATCGAT
GACGTCCAGG AAAAGCTCAA TCTGGATGAC AACCTGTTCG ACGCCTGGCG ATTGCGCGCC
GACCGCGCAG CCGATGAACT GGAAAAACTG GTCAACAAAC GCACGACGCG CTCTGGGTGG
AGTGTCGTGG GCGACTTTCT CGCCCTGTCG TTTGTGTGGA TCGGCTCGTT CGCGGTACTG
ACGACCCTCG GACGCTTCCT CGCCGTTCGC CTGTGCCGGA CCAACTTTAT CCATGTTCGC
GAGCGCAGCC AGGCGCTGCT CAAATACGTC TTGCCGTTCA CATTGCCGGC GATCATCTGC
CTGCCTTTGA CCCTGTATGT CAGTCACTTC ATGCCGGCAT CGGTCGGCCG TGCGCTGGCG
CTGTGTTTTG CCTACGCGAC CAGCAGCGGC ATCGTGTCCA CCTCGGTGCT GCTCTGCGTG
ATCGTGATGT TCAACTCCGG GCACAAGCGC GCTGCGGTGC GCATGATCCG CCGCTACGCG
CCAAGGCCCT TGTTTGTGGT CGGCTTTCTG GCGGCGCTGA GCGATGCACT GACCAGCCCG
CAGATCGCCC GTCAACTGGG CAGTAACGTT ACCACCAGCG TTGCAGTGTT CACCGGGCTG
TTCGCCTCGG TGGTGTTCTG CATGCTGATC ATCAAGGTAC GTCGCCCGGT CGCGCACCTG
ATCCGTAACC GCTCGTTGGG CAGCCGCTTG CAACGACCTG CACTGCAACA GTCGCTGAAG
ATATTCTCCA ATCTGTGGCA CCTGCCGATT CTGCTGATGA TTCTGGTCTC GGCGATCAAC
CTCATCGGTG CCGCTGAAGA CAGTCAGGAA GCGCTGCGTT GCGCGTTGTT CACGACCATT
CTGCTGATCG CCACGGTGTT TTTGAGTACG GTCTTCCAGC ACCTGTTCAA ACCGAACGAA
TCTCTGGGGC GCGGCGGCCA TGTGTACAAG GCGCGCCTGC TGAGCCTGCT GTATGCGGTG
GTGCGCATTG CGCTGGCCAT CACGTTCATT GAGGTGTTGG GGCGTATCTG GGGCTTCTCG
ATGTTCGAGT TTGCCCAGCG CAATACTCTG GGCCGGGTGA TCAGCGACTC GTTGAGCAGC
ATCGGCCTGA TATTCGTGGT CACCTGGTTG CTGTGGGTGG TGCTCGACAC CGCGATTCAG
GAAGCCCTCA AACCGCCGGT CAACCATCGC AGCGGCCGCC AGCCGAGCAC GCGCATCAAG
ACCATTCTGC CGCTGCTGCG CAACGCCGTT AAAATCATTC TGGTGGTGAT CTGCGCGATC
ACCACCATGG CCAATCTGGG CATCAATGTC GCGCCGCTGC TGGCGGGTGC CGGGGTGGTC
GGTCTGGCCA TCGGTTTTGG CTCGCAACAA CTGGTGCAGG ACGTCATCAC CGGCCTGTTC
ATCATCATCG AAGACACGTT CTCGGTGGGC GACTGGGTGG TGCTCAGCAC CGGCCATTCC
GGCTCGGTTG AAAGCCTGAC CATCCGCACC GTACGCCTGC GGGACGGCAA GGGCTTCGTT
CACTCGGTGC CGTTCGGGCA GATCAAGGCG GTCACCAACC AGTCGCGACA ATTCGCTTAC
GCGTTCTTCT CGGTGCAGTT CACCTACGAC TCCGATATCG ACGATGCGCT GGCGCTGATC
CGCGAAACCG GGCAGTCGAT CAGTGATGAC ATTCTGCTCA AGCACAACCT GCAGGGGCCG
CTGGAGGTGT TCGGCGTAGA CAGCATGAAC CTCAACGGCA TGGTGTTAAC GGCGCAATTT
CGGACCTCTT CCGGTGGTCA GTACGCAGTG GGGCGCGCCT TCAACGAGCG CCTCAAGCGG
CTTGTGGATA AAAACCCGAA CGTGCGTTTC TCGCAAACTT ATCCACAGGT GGTCATGGGG
CCGGGATTCA ACAATCCGCA AGCGGGCACC GAACCCGAAG GGCCTCCTGC ACCGTCGGAC
CCTGCTGCTG CCACACCTTC TGCGCCAGCA CCGGCACCGC TGGGTCTGCC CAAGGGTGGC
GGCGCGCCAG GGCCTGCGGC TTAA
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| Protein sequence | MASQLKILIL SGLLLLAGSF NLQAADVPAL PMGAAVPADD KAADKADGKA ADKAAAKPDE
KSAEKTDAKS DAAADPAAAD PAAELLVQGG LLGAISSSID DVQEKLNLDD NLFDAWRLRA
DRAADELEKL VNKRTTRSGW SVVGDFLALS FVWIGSFAVL TTLGRFLAVR LCRTNFIHVR
ERSQALLKYV LPFTLPAIIC LPLTLYVSHF MPASVGRALA LCFAYATSSG IVSTSVLLCV
IVMFNSGHKR AAVRMIRRYA PRPLFVVGFL AALSDALTSP QIARQLGSNV TTSVAVFTGL
FASVVFCMLI IKVRRPVAHL IRNRSLGSRL QRPALQQSLK IFSNLWHLPI LLMILVSAIN
LIGAAEDSQE ALRCALFTTI LLIATVFLST VFQHLFKPNE SLGRGGHVYK ARLLSLLYAV
VRIALAITFI EVLGRIWGFS MFEFAQRNTL GRVISDSLSS IGLIFVVTWL LWVVLDTAIQ
EALKPPVNHR SGRQPSTRIK TILPLLRNAV KIILVVICAI TTMANLGINV APLLAGAGVV
GLAIGFGSQQ LVQDVITGLF IIIEDTFSVG DWVVLSTGHS GSVESLTIRT VRLRDGKGFV
HSVPFGQIKA VTNQSRQFAY AFFSVQFTYD SDIDDALALI RETGQSISDD ILLKHNLQGP
LEVFGVDSMN LNGMVLTAQF RTSSGGQYAV GRAFNERLKR LVDKNPNVRF SQTYPQVVMG
PGFNNPQAGT EPEGPPAPSD PAAATPSAPA PAPLGLPKGG GAPGPAA
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