Gene PSPTO_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0673 
SymbolexbB-2 
ID1182293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp728838 
End bp729530 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content62% 
IMG OID637392048 
ProductTonB system transport protein ExbB 
Protein accessionNP_790520 
Protein GI28867901 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.649257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTG CTTATTCCGT ACTCATCACT CAATCTTCGA TGACGTTGCT GGTGATTTTC 
TCGCTGGTGA CCTGGGCGCT GCTGCTCGGC AAAACTCTTC AGCACTGGCG ACTGAGCCGT
CAGAACCGGC GCTACTCGAC GCAATTCTGG GCCGCCCGCG ACCTGAAAAA TGCGCTGCAC
CTGCCGCACA GTGAAGGCAG CCTGGCACGC CTGACCGACG CAGGCGCGCA GGCCCTCGCA
ACGCCGCACG ACTCGCCGGA CCTGGGCCAC AGCTGGAATC GTCAGGACCT GCTGGAGCGC
AGCCTGCGCC AGCAGATCCA CAAGGAGCGT CGTCGCCTGG AGAGCGGCAT GATCCTGCTG
GCCTCGATCG GCAGCACAGC GCCTTTTATC GGTCTGTTCG GCACCGTCTT CGGAATCATT
CACGCACTCA CAGCGATCAG CCAGGCCAAG TCAGCGAGCA TTGCGGTGGT TGCAGGGCCC
ATCGGTGAAG CCTTGGTGGC GACCGGCGTC GGTATCGCCG TCGCCGTGCC CGCCGTGCTG
GCCTACAACT TTTTCGGACG ACGCATGAAG CTGGTGATCG CCGACCTGGA GGAGTTCGCC
GTGGACTTTC TCAACCTCTC GCAGCGCAAC GCCTTCCGGT TGCAACCCGA GGGTCGCGAC
AAGGCAGCAC CTAACCTGAA AGGAGTGAGC TGA
 
Protein sequence
MNTAYSVLIT QSSMTLLVIF SLVTWALLLG KTLQHWRLSR QNRRYSTQFW AARDLKNALH 
LPHSEGSLAR LTDAGAQALA TPHDSPDLGH SWNRQDLLER SLRQQIHKER RRLESGMILL
ASIGSTAPFI GLFGTVFGII HALTAISQAK SASIAVVAGP IGEALVATGV GIAVAVPAVL
AYNFFGRRMK LVIADLEEFA VDFLNLSQRN AFRLQPEGRD KAAPNLKGVS