| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0672 |
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| Symbol | exbD-2 |
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| ID | 1182292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 728432 |
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| End bp | 728836 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392047 |
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| Product | TonB system transport protein ExbD |
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| Protein accession | NP_790519 |
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| Protein GI | 28867900 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.678508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCTTCT CCACCTCCCA TGACGACGAT GCAATCAGCG ACATCAACAT CACGCCGCTG
GTAGACGTAA TGCTGGTGCT GCTGGTGACG TTCATCGTCA CCGCGCCGTT GCTCAACAAC
TCCATCCCGC TGGACCTGCC GCAAACCGTC GCCACCACCT CACTGGACCA GGCAAGCCCC
ACAGTGGTGA GCGTCGACGC CAGCGGTGGT GTGTTCATTG ACAGCCAGGC GGTGGCAATG
GAGCAACTGC CGGACGCGCT GCAAGCCCTG CACGACCAAG ACCCGGACGT CGCCGTCAGC
CTGCGTGCTG ATCAGGCGAC CCGCTACGGC CGCGTCGCCC AAGTGCTGGC CGATGTGCAG
AAAGCCGGCA TCAGTCGCCT GTCGGTGATC ACCGAAAGCC CCTGA
|
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| Protein sequence | MSFSTSHDDD AISDINITPL VDVMLVLLVT FIVTAPLLNN SIPLDLPQTV ATTSLDQASP
TVVSVDASGG VFIDSQAVAM EQLPDALQAL HDQDPDVAVS LRADQATRYG RVAQVLADVQ
KAGISRLSVI TESP
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