| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0664 |
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| Symbol | ugpB |
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| ID | 1182284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 716929 |
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| End bp | 718365 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392039 |
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| Product | glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein |
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| Protein accession | NP_790511 |
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| Protein GI | 28867892 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTCA TCAGTAGAAT TTTTTCCGTA CTGGCACTGC TGCCGCTTGC CACTCAGGCG
CTCGCCGCAC CCGCCGAGTT CTGGTACAGC CACAGCGGTG CGGCGGCGAG CGCCATCGCA
GACGTGTGCA GAAGCTTCAA TGCGCAACGT GAGGAAGGCG ATCGCCTGCA CTGCATTCGC
CAAGGCACTT ATGAGCAGAC GTTGCAGAAA ACCGCCGCCG CCTATCGCGC CGGCATAGGC
CCGGCACTGG TCGAGATTTA TGACGTCGCC ACGCCGGACA TGCTGCTGGG TGGCGCTACG
CATGCGGTCG ATACGGTGAT GGCCGATCAT CAACGAGCCT ATTCAGATGA CGCGTTTCTA
CCCGCATTGC GGCGCTATTA CTCTGATGAT CACGGCACGC TAGCGGCCCA ACCCTTTGCG
GCCTCGACAG CGGTGTTTTA CACGCACCGA AAAGCGCTGG CTGCAGCGGG TATCAGTGAA
CCGCCTGCCA CTTGGGAAGC TTTCGATACT GCCTTGCGGG CCTTGAAGAG AAGTGGCCAC
ACGTGTCCTG TCGTAACTGA GTTTTCCCCG TGGATCTGGC TGGAACAGAC CAGTGCCGCA
CAAGGCACGC ACGTCGCGAT CCGCGCCGCA GGCACTGACC ATTATCAGTT CGACAAAGGC
ACGCACGTGC GCCTGATGAC CGACCTTGCG CGGTGGACCG CCGAAGGCCT TGTGCGGCAC
CAGGACTCGA CCCGCAGCGG CCAGCAGGGT CTGGCGTTTG CCACCGGCGA CTGCGCCATG
CTGCTGGATT CAACAGGCAG CTGGAATCTC ATGCACGGTG ATCTGGAGTC TGATATCGAG
GTGAGCGCAC TGCCGATCTA CGCTCAAACC CAGCGCCGCG CCAACGTCCC CGGCGGCTCT
TCGCTGTGGG TGATGCGCGG GCATTCTGTG CACGATTATC GAGTGGTTTC GGAATTTCTG
GCGTTCGTAC TGCAACCGGA TAACCAGTTG ATGTTCAGCG CACGGACGGG TTACCTGCCG
GTCACTCAGG CTGCGGCTGC GCGATTGCAA TCCAGCACAA AGAAGCCCTC GGCGGTGGCG
GTCGGGCTCG CCGCACTCAA CGATATCGAC GGGGAGCCCT CTGCTCCGTT GCGCTGCGGC
TTTATCACGC TGATGCGCTT GATCTGGTCG CAGGAAATGG AAAATGCGCT CGCAGGCCGT
CAAAGCGTTG ATAACGCACT GCGCCAGACA ACGATGCGCG CCAACGATCT GCTCAGCCTG
TTTCAACAGA TGCACCAGGC TCAGGCCAGC AACTCAGCTC TAGACACACA TCCTGCGACG
CTTCGCTTGC TCGCGAAGAG GCCCGTACAG CCCTCGGAAA TTGGGCGCGC GGACGATCGC
TTTGGCGAGC AAGCTCTCTC CGACAAGAAT CTCCACTCGA GCGAGGTAAC GCCATGA
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| Protein sequence | MPFISRIFSV LALLPLATQA LAAPAEFWYS HSGAAASAIA DVCRSFNAQR EEGDRLHCIR
QGTYEQTLQK TAAAYRAGIG PALVEIYDVA TPDMLLGGAT HAVDTVMADH QRAYSDDAFL
PALRRYYSDD HGTLAAQPFA ASTAVFYTHR KALAAAGISE PPATWEAFDT ALRALKRSGH
TCPVVTEFSP WIWLEQTSAA QGTHVAIRAA GTDHYQFDKG THVRLMTDLA RWTAEGLVRH
QDSTRSGQQG LAFATGDCAM LLDSTGSWNL MHGDLESDIE VSALPIYAQT QRRANVPGGS
SLWVMRGHSV HDYRVVSEFL AFVLQPDNQL MFSARTGYLP VTQAAAARLQ SSTKKPSAVA
VGLAALNDID GEPSAPLRCG FITLMRLIWS QEMENALAGR QSVDNALRQT TMRANDLLSL
FQQMHQAQAS NSALDTHPAT LRLLAKRPVQ PSEIGRADDR FGEQALSDKN LHSSEVTP
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