| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0663 |
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| Symbol | ugpA |
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| ID | 1182283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 716039 |
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| End bp | 716932 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392038 |
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| Product | glycerol-3-phosphate ABC transporter, permease protein |
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| Protein accession | NP_790510 |
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| Protein GI | 28867891 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGG GTGCGCATTT TCCGCAACCG CGTTTGGCGC TGCTGTTCGC GCTGCCGCAG
TTGCTCGCGC TCGGGCTGTT TTTCTATTGG CCTGCGCTCC AGGCACTCTG GTGGTCGTTT
CATCTGGTGC CCCCCTTTGG CAGTCACGAA ATCTTTGTCG GCTTGAGCAA TTATTGGCGG
GTACTGAAAG ACCCCGGCGT GCTCGCATCG CTGGGCTCGA CGCTGGTGTT CAGCCTGTCG
AGCGTGATGC TTTCGATCCT TATCGCGTTG GTGCTTGCGC TGTGCCTTGA GCTGAGGTTG
CGTGGCAACG CGGTGTTTCG CAACCTGCTG ATCTGGCCCT ACGCAGTATC GGGCGCGACC
ATCGGCATTG TCTTTCACGT GCTGGCCAAT CCGGTGATGG GCATTTTTGC CTGGCTCAAC
GCGATCGCCC CCGGTACCTG GGCGCCCTAC GCCATCCCCG TGCAAAGTAT GCTGCTGTTG
ATCGCGGCGT ATGCCTGGTG CCTGGTGCCG TTCAACTTTG TGATGCTGGT CGCCAGCCTG
AAGTCGGTGC CGGACGATTA CCTCGCCGCT GCGGCAATGG ATGGAGCAGG CCCCTTGCGC
CGCATGCTCG ATATTCAATT GCCACTGATC GCGCCGTATC TGCTGTTCGT GTTCGTCATC
GACCTGCTGG AAAGCCTGTC CAACAGTTTC GGACTGGTCG ACACCCTCAC TCACGGCGGG
CCGGGCGATA CCACCAACGT GTTGGCCTAC AAGATTTACA CCGACGGTTT CATGGGGCTG
GACCTGGCCG GATCATCGAC ACTTTCCGTG CTCATGCTGT TGGCAGTCGT GGCGTTGAGC
GTTGCACAGT TCAAGCTCAT GTCGCGCTTC AAACGCCGTG GGGTGAAAAC ATGA
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| Protein sequence | MKAGAHFPQP RLALLFALPQ LLALGLFFYW PALQALWWSF HLVPPFGSHE IFVGLSNYWR
VLKDPGVLAS LGSTLVFSLS SVMLSILIAL VLALCLELRL RGNAVFRNLL IWPYAVSGAT
IGIVFHVLAN PVMGIFAWLN AIAPGTWAPY AIPVQSMLLL IAAYAWCLVP FNFVMLVASL
KSVPDDYLAA AAMDGAGPLR RMLDIQLPLI APYLLFVFVI DLLESLSNSF GLVDTLTHGG
PGDTTNVLAY KIYTDGFMGL DLAGSSTLSV LMLLAVVALS VAQFKLMSRF KRRGVKT
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