| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0662 |
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| Symbol | ugpE |
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| ID | 1182282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 715149 |
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| End bp | 716042 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392037 |
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| Product | glycerol-3-phosphate ABC transporter, permease protein |
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| Protein accession | NP_790509 |
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| Protein GI | 28867890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGGC ACAGTCGGCT GCTCGATGCA GTTGCCTACT TACTGCTGAC GCTGGGTCTG
GTGTTCGCGT TGGGGCCGCT GTATATGGCG GTCTGCTCGG CGACCGTCAG TAACTCGCAG
CTGTTCACTT ACGGCCTTGC GGTCGTGCCC GGCGACCAGT TGCTGGAGAA CCTGCAGCAG
GTTACCCGGC GTCTGGACTT GCTGCGTTTG CTGGGCAACA GCCTATTGGT CGCCACGCTG
GTGGTGATCG GCAAACTGGC GCTCTCGGCC TTGACCGCCT TTGCGGTGGT GTACTTTCGC
AGCCGTTACA CGTCAGTGAT TTTCTTCGCT GTACTGGGCG CGCTGTTGCT GCCGCTGGAG
GTGCGCATCA TCCCCACGTA TGCCGTGGCC AGTGATCTCC TCGGGCCGCT GCGCACGGTA
TTGCGATGGC TGGGCATCCA GTGGCTGCCG GTGCCGACCA TTAATCTGCT CGACAGCTAC
ACCGGCCTCG CCCTGCCCCT GATCGCTTCG GCCACCGGTA CTTTTCTGTT TCGGCAGTTC
TACCAGACCC TGCCCGCCGA ACTGGTCGAG GCCGCGCGAA TGGATGGCGC CGGGCCGTGG
CGCTTTTTCA TCGACATTCT GCTGCCGCTG TCGAAGACCA ACTTCGCTGC GCTGGGCACG
CTGGTGTTTA TCGGCGCCTG GAAAGACTAC CTGTGGCCGC TGGTGGCGAC CAACCGCGAG
GACATGCGCA CGCTGGTGCT GGGCGTCGCC AGCTTTCTGC CGACCGATGC AAGTCAAATC
CCTGAATGGA ACCTGCTGAT GGCCGCTGCA GTGGTCAGCA TGCTGCCCCC TATCCTCGTC
ATTGCGCTCA TGCAGCGATG GTTCGTCAAA GGCCTGATCG GAGTCGGTAA ATGA
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| Protein sequence | MIRHSRLLDA VAYLLLTLGL VFALGPLYMA VCSATVSNSQ LFTYGLAVVP GDQLLENLQQ
VTRRLDLLRL LGNSLLVATL VVIGKLALSA LTAFAVVYFR SRYTSVIFFA VLGALLLPLE
VRIIPTYAVA SDLLGPLRTV LRWLGIQWLP VPTINLLDSY TGLALPLIAS ATGTFLFRQF
YQTLPAELVE AARMDGAGPW RFFIDILLPL SKTNFAALGT LVFIGAWKDY LWPLVATNRE
DMRTLVLGVA SFLPTDASQI PEWNLLMAAA VVSMLPPILV IALMQRWFVK GLIGVGK
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