| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0661 |
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| Symbol | ugpC |
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| ID | 1182281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 714046 |
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| End bp | 715152 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392036 |
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| Product | glycerol-3-phosphate ABC transporter, ATP-binding protein |
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| Protein accession | NP_790508 |
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| Protein GI | 28867889 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGC TCGCCCCCAT TACCTGTGCG CCGCAGATTG TCACCAAAGG GCTGCACAAA
ACGTATGGCA CCGGGCACAT CCTTCATGGC CTGGACCTGA CCTTCAAGGC TGGCGAACGG
AACGTCATCC TCGGCCCGTC GGGGTGTGGC AAGTCCACAC TGTTGCGCAT GGTCGCCGGG
CTGGAGGACG TCAGCCAAGG GCAGATTCTG ATGGGCGGCC GCGACGTCAC ACGTCTGCCG
CCCAAGGAAC GTGGCTGCGC AATGGTGTTT CAAAACTATG CGCTCTACCC GCACATGAGC
GTGGCCGACA ACATTGGCTA TGCGCTCAAG CTGGCCGGTG TTTCGCGCAA ACAGCGCGAG
CAGCGCGTAC GGGAATGCGC CAGCTCGCTG GGGCTGGAGG ACCTGCTGCA ACGCAAGCCC
GGCGAGCTGT CCGGTGGTCA GCGCCAGCGC GTCGCCATCG GCCGGGCGTT GATTCGCAAA
CCGCCGGTGC TGCTGTTCGA TGAGCCGCTG TGCAACCTGG ACAGCGCATT ACGCCATGAA
ATGCGCCTGT TGATTCGCAG CCTGCACCAG CAGACCGGCG CAACCATTCT GTATGTCACC
CACGATCAGA CCGAAGCCAT GACGCTCGCC GAGCGGGTGG TGATTCTCAA CCAGGGCCGT
GTCGAGCAGA TCGGTACGCC CGCCGACATC TATGATCAAC CCGCCAGCAC ATTCGTCGCC
CGCTTCATCG GCACCCCGCC GATGAACCTG CTGCCCGTAA CCTGTCTGGA AGACAACGTG
CTGATGCTCG CAGATGGGCA ACGCCTGCCC ATAAAGCTCG GTATCGGCGC CATCCGGACA
GGCAAATGGC TGATGGGGGT GCGACCCGAG ACCTTCACGC TGGATCAGAA CGGCGTGACT
GCCGTGGTGG AGTCTTCGGA AAATCTCGGC AGCCACAGCC TGCTGTATTG CAAATTGGCC
GGCACACGCT GCGTGGTCAG CCTCGCCGAC CGGCACCACC TGACGCCCGG CACCCAGGTG
CGGCTGGCGA TCAATCCCAC GCCCCTGCTG TTCGATATGG AGAGCGGCCA ACGCCTGCTC
GTTTCCTTCT CACACACCGC CAAGTGA
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| Protein sequence | MNALAPITCA PQIVTKGLHK TYGTGHILHG LDLTFKAGER NVILGPSGCG KSTLLRMVAG
LEDVSQGQIL MGGRDVTRLP PKERGCAMVF QNYALYPHMS VADNIGYALK LAGVSRKQRE
QRVRECASSL GLEDLLQRKP GELSGGQRQR VAIGRALIRK PPVLLFDEPL CNLDSALRHE
MRLLIRSLHQ QTGATILYVT HDQTEAMTLA ERVVILNQGR VEQIGTPADI YDQPASTFVA
RFIGTPPMNL LPVTCLEDNV LMLADGQRLP IKLGIGAIRT GKWLMGVRPE TFTLDQNGVT
AVVESSENLG SHSLLYCKLA GTRCVVSLAD RHHLTPGTQV RLAINPTPLL FDMESGQRLL
VSFSHTAK
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