| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0654 |
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| Symbol | uvrA |
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| ID | 1182274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 706024 |
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| End bp | 709002 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392029 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | NP_790501 |
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| Protein GI | 28867882 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTATCG TGCATGGAAT AACCTCGTGT GAACCGGCGG CGATTCTACC AGTCCCATCG
TTGTACAGCA CATACGCGAC GCTTTGCCGC GTGATGGCTC GGAGCCGTAT ACTCCGTCGT
TTATGCCCGC CAAGCGAGGC CGCAGTGGAC AAGATCCTGA TACGTGGGGC ACGAACCCAC
AACCTGAAAA ATATTGACCT GACACTTCCC CGCAACAAAC TGATCGTTAT CACCGGGCTC
TCCGGCTCAG GCAAGTCTTC GCTGGCTTTC GATACGCTGT ATGCCGAAGG GCAACGCCGT
TACGTCGAGT CGCTGTCTGC CTATGCACGA CAGTTTCTGT CGATGATGGA GAAGCCGGAC
GTCGATACGA TCGAAGGTCT GTCGCCGGCC ATTTCCATCG AGCAGAAATC CACGTCGCAC
AACCCGCGCT CGACCGTGGG CACGATTACC GAGATTTACG ATTACCTGCG TCTTTTATAT
GCGCGGGTCG GACAGCCTCG CTGCCCGGAT CACGATATTC CGCTGGAAGC CCAGACCGTC
AGCCAGATGG TTGACCTGGT GCTGACTCAA CCCGAAGGCA GCAAACTGAT GCTGCTGGCG
CCGGTTATTC GCGAGCGCAA GGGTGAACAC CTTTCGGTAT TCGAAGAGCT GCGTGCGCAG
GGTTTTGTGC GGGCGCGGGT TAACGGTCGG CTGTGTGAGC TGGATGAACT GCCGAAGCTG
GACAAGCAGA AGAAGCACTC CATTGACGTG GTAGTGGACC GCTTCAAGGT TCGCGCCGAC
CTGCAGCAGC GTCTGGCCGA GTCTTTCGAG ACGGCATTGA AGCTGGCAGA CGGCATTGCG
CTGGTCGCAC CGATGGACGA CGAGCCAGGC GAAGAAGTAA TTTTCTCCGC CCGCTTCGCC
TGCCCGATCT GTGGCCACGC GATCAGCGAG CTTGAACCCA AGCTGTTCTC CTTTAACAAC
CCGGCTGGCG CATGCCCGAC CTGCGACGGT CTGGGCGTGA AGCAGTTCTT TGATATCAAG
CGGCTGGTCA ACGCCGAGCT GACGCTGGCT GAAGGCGCGA TACGCGGCTG GGACAGGCGT
AACGTCTATT ATTTCCAGAT GCTCGGCTCG CTGTCCAAGC ACTACGGTTT CAGCCTGGAA
GTGCCGTTCA AAGAAATCCC GGCCGACATG CAGAAGGTTC TGCTTAATGG CAGCGGCTCG
CAGAGTGTCG ACTTCCGCTA TCTGAATGAT CGCGGCGATA TCGTCAAACG TGCGCACCCG
TTCGAAGGCA TCGTGCCGAA TCTGGAACGT CGCTATCGGG AAACCGAATC AGCGACCGTG
CGCGAGGAGC TGGCCAAGTT TCTCGGTACA CAGCCCTGCC CTGACTGCCG CGGCACTCGC
CTGCGTCGCG AGGCACGTCA TGTGTGGGTG GGTGAAAAGA CCTTGCCTGC GGTGACCAAT
CTGCCGATTG GCGACGCCAC GCATTATTTT GAAACGCTGA AGCTGACCGG CCGACGCGGC
GAAATTGCCG ACAAGATTCT CAAAGAGATC CGCGAGCGTT TGCAGTTTCT GGTAAACGTC
GGTCTGGACT ACCTGACCCT GGATCGCAGC GCAGACACGC TGTCTGGCGG TGAAGCGCAG
CGCATTCGTC TGGCCAGTCA GATCGGTGCG GGCCTGGTCG GAGTGATGTA CATCCTCGAT
GAGCCGTCTA TTGGCCTGCA TCAGCGCGAC AACGACCGTT TGCTGGGCAC GCTCAAGCAC
CTGCGCGACA TCGGCAACAC GGTGATTGTG GTCGAGCATG ATGAAGATGC GATTCGTCTC
GCCGACTACG TGGTCGATAT CGGCCCTGGC GCTGGCGTGC ACGGCGGGCA TATCGTTGCC
GAAGGCACGC CGGACGAGGT GATGGCGCAC CCTGACTCAC TGACCGGCAA ATACCTGTCG
GGACGTGTGA AGATCGCCGT ACCCGCCAAG CGCACGCCCC GCAACAAGAA GCTGTCGTTG
ACACTCAAGG GTGCGCGTGG CAACAACCTG CAGAACGTCA ACCTCGACAT TCCGATTGGC
CTGCTGACCT GTGTGACGGG CGTTTCCGGT TCGGGCAAGT CGACGCTGAT CAACAACACG
CTGTTCCCGC TGAGTGCTAC GGCGCTCAAC GGCGCAACGA CGCTTGAGGC TGCCGCTCAC
GACAGCATCA ACGGCCTGCA GCATCTGGAC AAGGTCGTGG ACATCGATCA GAGCCCTATC
GGTCGTACGC CACGCTCCAA CCCGGCGACT TATACCGGGC TGTTCACGCC GATTCGCGAA
CTGTTTGCCG GTGTGCCGGA ATCGCGCTCG CGGGGCTATG GCCCGGGACG GTTCTCGTTC
AACGTCAAGG GCGGTCGTTG CGAAGCGTGT CAGGGCGATG GCTTGATCAA GGTCGAGATG
CACTTTCTGC CGGACATCTA TGTGCCGTGC GATGTGTGCA AGAGCAAGCG CTACAACCGT
GAAACCCTTG AGATCAAATA CAAGGGCAAG AACGTCCACG AAGTGCTTGA GATGACCATC
GAAGAAGCGC GCGAGTTCTT CGACGCCGTC CCTGCACTGG CGCGCAAGCT GCAAACCCTG
ATGGACGTAG GGCTTTCCTA TATCAAGCTG GGTCAATCGG CGACCACCCT GTCGGGCGGT
GAAGCTCAGC GCGTCAAGCT GTCGCGTGAG CTGTCCAAGC GCGACACTGG CAAGACGCTT
TATATCCTCG ACGAACCGAC TACCGGCCTG CACTTTGCCG ATATTCAACA GTTGCTGGAT
GTCCTGCATC GCCTGCGCGA CCATGGCAAC ACGGTGGTGG TAATCGAGCA CAATCTGGAT
GTCATCAAGA CGGCAGACTG GTTGGTGGAC CTGGGGCCGG AAGGCGGCTC AAGAGGCGGG
CAGATCATTG CGACCGGCAC ACCTGAGCAG GTCGCCGAGA TGGAGCAGTC GTATACCGGG
CATTACCTCA AGCCTCTGTT GATCAGAGAC AGGGCTTAA
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| Protein sequence | MGIVHGITSC EPAAILPVPS LYSTYATLCR VMARSRILRR LCPPSEAAVD KILIRGARTH
NLKNIDLTLP RNKLIVITGL SGSGKSSLAF DTLYAEGQRR YVESLSAYAR QFLSMMEKPD
VDTIEGLSPA ISIEQKSTSH NPRSTVGTIT EIYDYLRLLY ARVGQPRCPD HDIPLEAQTV
SQMVDLVLTQ PEGSKLMLLA PVIRERKGEH LSVFEELRAQ GFVRARVNGR LCELDELPKL
DKQKKHSIDV VVDRFKVRAD LQQRLAESFE TALKLADGIA LVAPMDDEPG EEVIFSARFA
CPICGHAISE LEPKLFSFNN PAGACPTCDG LGVKQFFDIK RLVNAELTLA EGAIRGWDRR
NVYYFQMLGS LSKHYGFSLE VPFKEIPADM QKVLLNGSGS QSVDFRYLND RGDIVKRAHP
FEGIVPNLER RYRETESATV REELAKFLGT QPCPDCRGTR LRREARHVWV GEKTLPAVTN
LPIGDATHYF ETLKLTGRRG EIADKILKEI RERLQFLVNV GLDYLTLDRS ADTLSGGEAQ
RIRLASQIGA GLVGVMYILD EPSIGLHQRD NDRLLGTLKH LRDIGNTVIV VEHDEDAIRL
ADYVVDIGPG AGVHGGHIVA EGTPDEVMAH PDSLTGKYLS GRVKIAVPAK RTPRNKKLSL
TLKGARGNNL QNVNLDIPIG LLTCVTGVSG SGKSTLINNT LFPLSATALN GATTLEAAAH
DSINGLQHLD KVVDIDQSPI GRTPRSNPAT YTGLFTPIRE LFAGVPESRS RGYGPGRFSF
NVKGGRCEAC QGDGLIKVEM HFLPDIYVPC DVCKSKRYNR ETLEIKYKGK NVHEVLEMTI
EEAREFFDAV PALARKLQTL MDVGLSYIKL GQSATTLSGG EAQRVKLSRE LSKRDTGKTL
YILDEPTTGL HFADIQQLLD VLHRLRDHGN TVVVIEHNLD VIKTADWLVD LGPEGGSRGG
QIIATGTPEQ VAEMEQSYTG HYLKPLLIRD RA
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