Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0634 |
Symbol | rpmC |
ID | 1182254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 696033 |
End bp | 696224 |
Gene Length | 192 bp |
Protein Length | 63 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637392009 |
Product | ribosomal protein L29 |
Protein accession | NP_790481 |
Protein GI | 28867862 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0255] Ribosomal protein L29 |
TIGRFAM ID | [TIGR00012] ribosomal protein L29 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000013157 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGA ATGAACTTCG TGAAAAATCA GCACAGCAGC TGAACGAGCA ACTGCTCGGC CTGCTGCGCG ACCAGTTCAA TCTGCGTATG CAGAAAGCAA CTGGCCAGTT GGGGCAGTCT CATCTGCTCT CGCAAGTTAA GCGTGACATC GCTCGCGTGA AAACTGTGCT CAACCAGCAG GCAGGTAAGT AA
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Protein sequence | MKANELREKS AQQLNEQLLG LLRDQFNLRM QKATGQLGQS HLLSQVKRDI ARVKTVLNQQ AGK
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