| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0631 |
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| Symbol | rplV |
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| ID | 1182251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 694575 |
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| End bp | 694907 |
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| Gene Length | 333 bp |
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| Protein Length | 110 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637392006 |
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| Product | ribosomal protein L22 |
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| Protein accession | NP_790478 |
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| Protein GI | 28867859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0091] Ribosomal protein L22 |
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| TIGRFAM ID | [TIGR01044] ribosomal protein L22, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000531978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAGTAG CCGCTAAGTT GTCGGGCGCT CGAATCTCCG CCCAGAAAGC CCGCTTGGTC
GCCGACCAGA TCCGCGGGAA GAAGGTGGGC GAAGCGCTCA ACCTGTTGGC TTTCAGCAGT
AAGAAAGCCG CCGAGATCCT GAAGAAAGTG CTGGAGTCGG CTGTAGCCAA CGCCGAGCAT
AACGAAGGCG CAGACGTTGA TGACCTCAAG GTCTCCACCG TCTTCGTCAA CGAAGGGCGT
TCGCTGAAGC GCATCATGCC ACGTGCTAAA GGCCGTGCTG ATCGCATCGT CAAGCGGTCT
TGCCATATCA CTGTCAAGGT TGCTGACAAG TAA
|
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| Protein sequence | MEVAAKLSGA RISAQKARLV ADQIRGKKVG EALNLLAFSS KKAAEILKKV LESAVANAEH
NEGADVDDLK VSTVFVNEGR SLKRIMPRAK GRADRIVKRS CHITVKVADK
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