| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0625 |
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| Symbol | rpsJ |
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| ID | 1182245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 691491 |
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| End bp | 691802 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637392000 |
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| Product | ribosomal protein S10 |
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| Protein accession | NP_790472 |
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| Protein GI | 28867853 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000466292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAACC AGCAAATCCG TATCAGGTTG AAGGCTTTTG ACCATCGCCT GATCGACCAA
TCAACCCAGG AAATCGTGGA AACCGCGAAA CGTACTGGTG CACAGGTGCG TGGTCCGATT
CCACTGCCGA CCCGTAAAGA GCGGTTCACC GTTCTGGTTT CTCCGCACGT CAACAAAGAC
GCGCGCGACC AGTACGAGAT CCGTACTCAC AAGCGTGTTC TGGACATTGT CCAGCCAACG
GAAAAAACCG TTGATGCGCT TATGAAGCTT GATCTTGCGG CCGGTGTGGA AGTTCAGATC
AGCCTCGGCT AA
|
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| Protein sequence | MQNQQIRIRL KAFDHRLIDQ STQEIVETAK RTGAQVRGPI PLPTRKERFT VLVSPHVNKD
ARDQYEIRTH KRVLDIVQPT EKTVDALMKL DLAAGVEVQI SLG
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