Gene PSPTO_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0623 
SymbolfusA 
ID1182243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp688019 
End bp690124 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content54% 
IMG OID637391998 
Producttranslation elongation factor G 
Protein accessionNP_790470 
Protein GI28867851 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0318981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA CTACTCCGAT TAGCCGTTAC CGTAACATCG GTATCGTCGC TCACGTGGAT 
GCTGGTAAAA CCACCACCAC CGAGCGCGTC CTTTTTTACA CCGGCAAAAG CCACAAAATG
GGCGAGGTGC ATGATGGCGC CGCGACCACG GACTGGATGG TTCAGGAGCA GGAGCGTGGT
ATTACCATTA CTTCTGCTGC TATCACTGCC TTTTGGCAGG GTTCCGAGAA GCAACACAAA
GACCAATACC GCTTCAACGT CATTGACACC CCGGGTCACG TAGACTTCAC CATTGAAGTT
GAGCGTTCCC TGCGTGTGCT CGACGGCGCG GTCGTTGTGT TCTGTGGTAC TTCCGGCGTA
GAACCGCAGT CCGAAACCGT ATGGCGTCAA GCCAACAAAT ACGGCGTTCC ACGTATCGTC
TACGTGAACA AGATGGACCG TGCCGGTGCC AACTTTTTGC GCGTAATCGC CCAGATCAAG
CAGCGCCTGG GTCACACCCC GGTGCCGATT CAGTTGGCCA TTGGTGCTGA AGACAACTTC
CAGGGTCAAA TTGACCTGAT GGCTATGGAA GCTGTTTACT GGAACGATTC CGACAAAGGC
ATGGTTCCTG TTCGTAAGCC AATCCCTGCT GAATTGCAGG AGCTGGCTGA TGAATGGCGT
GGCAACATGG TTGAGGCTGC GGCTGAAGCC AGCGAAGAGC TGATGAACAA GTACCTTGAA
GGTGAAGAGC TCACCAACGA GGAAATCAAG GCCGCTCTGC GTCAGCGTAC TATCGCTGGT
GAGATCGTTC TTGCTGTTTG CGGTTCTTCC TTCAAGAACA AGGGTGTTCC CCTGGTTCTC
GACGCCGTGA TCGACTACCT GCCTGCTCCA ATCGATATTC CTGCTATCAA GGGTTCCGAT
CCTGATAATG AGGAAATTCT GATGGAGCGT CATGCAGACG ACAGCGAGCC GTTCTCGGCG
CTGGCGTTCA AGATCGCTAC CGACCCATTC GTGGGTACTT TGACTTTCGT CCGCGTTTAC
TCGGGCGTGT TGGCATCCGG CGACGGCGTG ATCAACTCGG TCAAAGGCAA GAAAGAGCGC
GTGGGTCGTA TGGTGCAAAT GCACGCAAAC GCCCGCGAAG AGATCAAGGA AGTACGCGCT
GGCGACATCG CGGCCCTGAT CGGCATGAAG GACGTCACCA CTGGTGAAAC CTTGTGCAAC
GCTGACAAGC CAATCATCCT CGTTCGTATG GACTTCCCGG AGCCGGTTAT TTCGGTTGCC
GTTGAGCCAA AAACCAAGGA TGACCAGGAA AAAATGGGTA TTGCACTGGG CAAGCTTGCT
CAGGAAGACC CTTCTTTCCG CGTCAAAACT GATGAAGAGA CTGGTCAAAC GATCATCTCT
GGCATGGGCG AGCTCCACCT GGACATCCTG GTTGACCGGA TGCGCCGTGA GTTCAACGTC
GAAGCCAACA TCGGCAAGCC GCAGGTTTCC TATCGTGAGC GCATCACGAA GAATTGTGAA
ATCGAAGGCA AGTTCGTTCG TCAGTCCGGC GGTCGTGGCC AGTTTGGTCA TTGCTGGATC
CGTTTTGCTC CTGCTGACGA AGGTCAGGAA GGTCTGCAAT TCGTAAACGA AGTGGTGGGT
GGTGTTGTTC CGAAGGAATA CATCCCGGCT ATCCAGAAGG GTATCGAAGA GCAGATGAAG
AACGGCGTTG TTGCCGGCTA TCCGCTGATC GGCCTGAAGG CTACCGTGTT TGATGGTTCC
TACCATGACG TCGACTCGAA CGAGATGGCG TTTAAGGTGG CTGCTTCCAT GGCGACCAAG
CAGCTGGCCC AGAAGGGCGG TGGTGAGTTG CTTGAGCCGA TCATGGCGGT AGAGGTTGTT
ACGCCTGAAG ACTATATGGG TGACGTGATG GGCGACCTTA ACCGTCGTCG CGGCATGATC
CTGGGTATGG AAGACACGGT TTCCGGCAAA GTAATTCGTG CCGAGGTTCC GTTGGGTGAG
ATGTTCGGTT ATGCGACCGA CGTCCGCTCC ATGTCCCAAG GTCGCGCAAG CTACTCTATG
GAATTCAAAA AATACAATAC AGCGCCGTCG CACATCGTCG AAACTGTAAC CAAAAAACAA
GGCTGA
 
Protein sequence
MARTTPISRY RNIGIVAHVD AGKTTTTERV LFYTGKSHKM GEVHDGAATT DWMVQEQERG 
ITITSAAITA FWQGSEKQHK DQYRFNVIDT PGHVDFTIEV ERSLRVLDGA VVVFCGTSGV
EPQSETVWRQ ANKYGVPRIV YVNKMDRAGA NFLRVIAQIK QRLGHTPVPI QLAIGAEDNF
QGQIDLMAME AVYWNDSDKG MVPVRKPIPA ELQELADEWR GNMVEAAAEA SEELMNKYLE
GEELTNEEIK AALRQRTIAG EIVLAVCGSS FKNKGVPLVL DAVIDYLPAP IDIPAIKGSD
PDNEEILMER HADDSEPFSA LAFKIATDPF VGTLTFVRVY SGVLASGDGV INSVKGKKER
VGRMVQMHAN AREEIKEVRA GDIAALIGMK DVTTGETLCN ADKPIILVRM DFPEPVISVA
VEPKTKDDQE KMGIALGKLA QEDPSFRVKT DEETGQTIIS GMGELHLDIL VDRMRREFNV
EANIGKPQVS YRERITKNCE IEGKFVRQSG GRGQFGHCWI RFAPADEGQE GLQFVNEVVG
GVVPKEYIPA IQKGIEEQMK NGVVAGYPLI GLKATVFDGS YHDVDSNEMA FKVAASMATK
QLAQKGGGEL LEPIMAVEVV TPEDYMGDVM GDLNRRRGMI LGMEDTVSGK VIRAEVPLGE
MFGYATDVRS MSQGRASYSM EFKKYNTAPS HIVETVTKKQ G