| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0621 |
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| Symbol | rpsL |
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| ID | 1182241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 687024 |
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| End bp | 687395 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637391996 |
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| Product | ribosomal protein S12 |
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| Protein accession | NP_790468 |
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| Protein GI | 28867849 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0467971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTA TCAACCAGCT GGTACGTCAG CCGCGTAAGC GTATCGTCGA GAAATCCGAC
GTGCCTGCGC TGCAGAACTG CCCGCAACGT CGCGGTGTGT GCACTCGTGT GTATACCACT
ACGCCGAAAA AACCTAACTC GGCATTGCGT AAAGTCTGCC GTGTGCGCCT GACCAACGGT
TTCGAGGTTT CCTCGTACAT CGGTGGTGAA GGTCACAACC TGCAAGAGCA CAGCGTGGTA
CTGATCCGTG GCGGTCGTGT AAAAGACTTG CCAGGTGTTC GCTATCACAC CGTTCGTGGT
TCTCTGGATA CCTCCGGCGT CAAAGGTCGT AACCAGGGTC GCTCGAAATA CGGTACCAAG
AAGCCTAAGT AG
|
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| Protein sequence | MATINQLVRQ PRKRIVEKSD VPALQNCPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG
FEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKGR NQGRSKYGTK
KPK
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