| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0616 |
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| Symbol | rplA |
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| ID | 1182236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 676424 |
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| End bp | 677119 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637391991 |
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| Product | ribosomal protein L1 |
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| Protein accession | NP_790463 |
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| Protein GI | 28867844 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.710053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTAAGC TGACCAAGCG TCAAAAGGCA ATCGCCGAAA AGATTGAAGC TGGCAAGTCC
TACAACTTTG TAGACGCCGC TGCTCTGCTG ACCGAGCTGT CGACTGTCAA GTTCAGCGAG
TCTATCGACG TCGCTGTCAA CCTGGGTGTT GATCCTCGTA AATCTGATCA GGTTGTTCGT
AGCGCTACCG TACTGCCGCA CGGCACCGGT AAAACTGTAC GCGTTGCAGT TTTCACCCAG
GGGCCTGCTG CTGAAGCTGC TCTGGCTGCT GGTGCTGATC GCGTTGGTAT GGACGATCTG
GCTGCTGAAA TGAAAGCCGG CGATCTGAAC TACGACGTCG TCATCGCTTC CCCTGACGCA
ATGCGCGTTG TGGGTCAGCT GGGTCAGGTT CTCGGTCCTC GTGGCCTGAT GCCTAACCCA
AAAGTCGGCA CTGTTACTCC TGACGTGGCT ACCGCTGTCA AGAACGCCAA GGCTGGTCAG
GTTCGTTATC GCACCGACAA AAACGGCATT ATCCACACTT CCGTTGGCAA GGTCGGTTTC
GACGCAGTCA AGCTGAAGGA AAACGTTGAA GCCCTGATCG CTGATCTGAA GCGTATCAAG
CCTGCTTCCT CGAAAGGCAT TTACGTCAAG CGCATCACCC TGAGCACCAC TATGGGTCCG
GGCCTGGTCA TCGACCAAGG TTCGCTGGAA GCGTAA
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| Protein sequence | MAKLTKRQKA IAEKIEAGKS YNFVDAAALL TELSTVKFSE SIDVAVNLGV DPRKSDQVVR
SATVLPHGTG KTVRVAVFTQ GPAAEAALAA GADRVGMDDL AAEMKAGDLN YDVVIASPDA
MRVVGQLGQV LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VRYRTDKNGI IHTSVGKVGF
DAVKLKENVE ALIADLKRIK PASSKGIYVK RITLSTTMGP GLVIDQGSLE A
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