| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0615 |
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| Symbol | rplK |
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| ID | 1182235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 675993 |
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| End bp | 676424 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637391990 |
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| Product | ribosomal protein L11 |
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| Protein accession | NP_790462 |
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| Protein GI | 28867843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.956774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAAGA AGATAACCGC ATACATCAAG CTGCAAGTGA AAGCCGCTCA GGCTAACCCT
AGCCCGCCAG TTGGTCCTGC TCTGGGTCAG CACGGTGTGA ACATCATGGA ATTCTGCAAA
GCGTTCAACG CCCGTACTCA GGGTATTGAG CCAGGCCTGC CGACTCCAGT GATCATCACT
GTATACAGCG ACCGTAGCTT CACTTTTGAA ACAAAAAGTA CTCCTGCATC GGTTCTGCTG
AAGAAAGCTG CAGGCTTGAC CAGCGGCTCG GCTCGCCCGA ACACCGTTAA AGTCGGCACC
GTGACTCGTG CTCAGCTGGA AGATATCGCT AAAGCAAAAA ATGCGGATCT GACTGCAGCT
GACATGGAAG CGGCCGTGCG TACCATCGCC GGTTCCGCTC GTAGCATGGG CCTTAACGTG
GAGGGTGTGT AA
|
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| Protein sequence | MAKKITAYIK LQVKAAQANP SPPVGPALGQ HGVNIMEFCK AFNARTQGIE PGLPTPVIIT
VYSDRSFTFE TKSTPASVLL KKAAGLTSGS ARPNTVKVGT VTRAQLEDIA KAKNADLTAA
DMEAAVRTIA GSARSMGLNV EGV
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