| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0610 |
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| Symbol | birA |
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| ID | 1182226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 672113 |
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| End bp | 673072 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637391981 |
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| Product | birA bifunctional protein |
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| Protein accession | NP_790457 |
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| Protein GI | 28867838 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
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| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACCT TGTTAAAGCT TCTTGCTGAT GGTGCATTTC ATTCTGGACA GGTCCTGGGC
GAGTCCCTCG GCGTAAGCCG TAGCGCCGTC TGGAAACAGC TTCAGCAGCT TGAGTCGGAT
CTCGATATCG AGGTTCATAA AGTGCGTGGG CGTGGCTATC GACTGGCGAC GCCTATAGTT
CTTTTAGATC CTGCTGCCAT AGTCGAGTCT GGAATGCCTG GCGAGTGGTC TGTGCGCACA
TACGACTCTA TCGATTCGAC CAATGCAGAG GCTTCGCGGC TTATCGCCCT TGGGGCTCCA
ATGCCACTGC TCGTTGTTGC CGAACAGCAA ACGGCCGGCA GGGGGCGGCG TGGTCGCAAG
TGGGTAAGCC CATTTGCCGA AAACCTGTAT TACAGCCTTG TGCTGCGCAT CGATGGTGGG
ATGCGTCAGT TGGAAGGGCT CAGTCTGCTG GTAGGGCTTG CGGTGATGAA TGTCCTGCGT
GATATGGGGG TTCAGGGCGC GGGTCTTAAA TGGCCCAACG ATGTGCTGGT CGGGCGACAA
AAAATCGCCG GTATCCTGCT TGAGCTTATT GGCGATCCCG CAGATGTGTG TCACGTGATC
ATCGGGGTCG GCGTGAACGT CAACATGCGT GCGTCTACCG AGGTCGATCA GTTGTGGACG
TCGGTCAGGC TGCAAACGGG CGCGCCTGCC GATCGCAATA CTATCGCGGC CCGCATAAGT
TCTCAGCTTG AGGCTCTTCT GGTTGTTCAT CGTCAGGAAG GCTTTTTAGC GTTCCAGAAG
GAGTGGGAGC AAGGGCATTT GTGGCAGGGA GCTGCAGTGA AGTTGCTTTC GGGAATCGAG
ACGGTGGAAG GGGTGGTGTT AGGCGTCGAC TCACTTGGAG CGTTGCGGTT GGAAGTCAAT
GGTTTGGAAA AGAGCTTTAG TGGTGGTGAG CTCAGCCTGA GGTTGCGCGA TGATTCTTGA
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| Protein sequence | MLTLLKLLAD GAFHSGQVLG ESLGVSRSAV WKQLQQLESD LDIEVHKVRG RGYRLATPIV
LLDPAAIVES GMPGEWSVRT YDSIDSTNAE ASRLIALGAP MPLLVVAEQQ TAGRGRRGRK
WVSPFAENLY YSLVLRIDGG MRQLEGLSLL VGLAVMNVLR DMGVQGAGLK WPNDVLVGRQ
KIAGILLELI GDPADVCHVI IGVGVNVNMR ASTEVDQLWT SVRLQTGAPA DRNTIAARIS
SQLEALLVVH RQEGFLAFQK EWEQGHLWQG AAVKLLSGIE TVEGVVLGVD SLGALRLEVN
GLEKSFSGGE LSLRLRDDS
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