| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0607 |
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| Symbol | |
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| ID | 1182218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 663384 |
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| End bp | 664808 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637391973 |
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| Product | peptidase, M23/M37 family |
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| Protein accession | NP_790454 |
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| Protein GI | 28867835 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0513451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACA CACCGCCTAA AGCGCCCCCG CTTTATCCGA AGAGTCACCT GCTCGCTGCA
AGCGGCATCG CCGCGTTGTT GAGCCTGGCT CTCCTGGTTT TCCCTTCAAG CGAAGTCGAA
GCCAAACGAA CGAACCTTGC CCTTGATCTG GAGATGCCAG ATCAGGACGT ACAAGACCAA
GACGCTGCGA AAGACACTCA AGCCACACCT GAAACCACAG AATCGCCATT TGCCCAGATC
GACAACGCTG ACGATCAGGC TCAGAACACC GCCACCGCAC AGCCGGAGGC AGAAAAACCG
GCTCCGGCCG CTGCCAAGGA CCCCAATCAT CGGGAAGTCA CTGTCAGCAA GGGCGACACG
CTTTCGACGT TGTTTGAAAA AGTCGGCCTG CCCGCCTCCA CGGTTCATGA GGTTCTGGCC
AGCGACAAGC AAGCCAGGCA GTTCAGCAAG CTGCAGAACG GGCAGACCCT GCAGTTCGAG
TTGTCGCCGG ATGGCCAGCT CAAACAACTG CACACCAAGC TCAGCGAACT CGAGACCATC
AGCCTGTCGA AATCGGCTTC CGGCTTCGTG TTCAATCGCG AAATCAGCAA GCCCAACGTG
CGCAACGCTT ACGTACACGG CGTGATCAAC AGCTCCCTTT CGCAATCCGC GCAACGTGCT
GGTCTGACGC ACACCATGAC GATGGACATG GCCAATATCT TCGGCTACGA CATCGACTTT
GCTCAGGACA TCCGCAAGGG CGACGAATTT GATGTGGTGT ACGAGCAAAA AGTAGTCAAC
GGCAAAAGCG TCGGCACAGG CAATATTCTT TCCGCCCGCT TCACCAACCG CGGCAAGACC
TACACGGCCG TGCGTTACAC CAGCAAACAA GGCACTACCA ATTACTACAC CGCCGACGGC
AACAGCATGC GCAAGGCGTT TATCCGTACA CCGGTAGACT TCGCCCGCAT CAGCTCGATG
TTCTCGATGG GTCGCAAACA CCCGATCCTC AACAAGATAC GCGCGCACAA AGGCGTCGAT
TATGCGGCGC CACGCGGTAC GCCGATCAAG GCGACCGGCG ATGGCAAGGT TCTGCTGGCT
GGCCGTCGCG GCGGCTACGG CAACACAGTC ATCATTCAGC ACGGCGACAC CTACCGTACG
CTGTATGGCC ACATGCAGGG TTTCGCCAAA GGTGTACAAA CCGGTGGAAC CGTCAAGCAA
GGTCAGGTAA TCGGCTATAT TGGAACGACA GGCCTGTCGA CTGGCCCGCA TTTGCACTAT
GAGTTTCAGG TCAATGGTGT TCATGTAGAC CCGCTGGGCC AGAAGCTTCC GATGGCGGAT
CCGATCGCCA AATCCGAAAA ACAGCGGTTC ATGCAGCAAA GCCAGCCGTT AATGGCGCGC
ATGGATCAGG AAAAGGCCAC CACGCTGGCC TCGAATAAAA GGTAA
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| Protein sequence | MKDTPPKAPP LYPKSHLLAA SGIAALLSLA LLVFPSSEVE AKRTNLALDL EMPDQDVQDQ
DAAKDTQATP ETTESPFAQI DNADDQAQNT ATAQPEAEKP APAAAKDPNH REVTVSKGDT
LSTLFEKVGL PASTVHEVLA SDKQARQFSK LQNGQTLQFE LSPDGQLKQL HTKLSELETI
SLSKSASGFV FNREISKPNV RNAYVHGVIN SSLSQSAQRA GLTHTMTMDM ANIFGYDIDF
AQDIRKGDEF DVVYEQKVVN GKSVGTGNIL SARFTNRGKT YTAVRYTSKQ GTTNYYTADG
NSMRKAFIRT PVDFARISSM FSMGRKHPIL NKIRAHKGVD YAAPRGTPIK ATGDGKVLLA
GRRGGYGNTV IIQHGDTYRT LYGHMQGFAK GVQTGGTVKQ GQVIGYIGTT GLSTGPHLHY
EFQVNGVHVD PLGQKLPMAD PIAKSEKQRF MQQSQPLMAR MDQEKATTLA SNKR
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