Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0596 |
Symbol | crp |
ID | 1182207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 654628 |
End bp | 655272 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391962 |
Product | catabolite gene activator Crp |
Protein accession | NP_790443 |
Protein GI | 28867824 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGCAA TAAGCTTTAC ACCCAAAGCG AACGGTCTGG ACAAGCTGCT GCCCCATGCA GAGCGGCGTC GCTGCCCCGC GAAAACCAAC ATCATCAGTG CGGGAGATCG CTCCGAGTCG TTGTTCTTCA TCCTCAAAGG CACCGTCACG GTGTTGATAG AAGACGACGA ACGGCGGGAA ATGATTGTCG CCTACCTCAA CAACGGAGAC TTCTTCGGCG AACTGGGCCT GTTCGAGCAG CCGGGGCATG AATCCGTGCG CAGCGCATGG GTGCGTGCCA AGACCGAGTG CGAGGTCGCC GAGATACCCT ACGAGACCTT TCGCGAGCTG ACCCGAAAAG ACCCGGAAAT TCTCTACGCC ATCGGCAGTC AGATGGCCGA GCGCCTGCGC AATACCACGC GCAAGGTGGG CGATCTGGCG TTTCTCGATG TCACCGGACG CGTCGCCCGT ACGTTGCTGG ACCTGTGCAA GCAGCCGGAC GCCATGACCC ACCCGGACGG CATGCAGATC AAGATTACCC GCCAGGAAAT CGGACGCATC GTGGGTTGTT CGAGGGAAAT GGTCGGCCGC GTACTCAAGG CGCTGGAAGA ACAGAGTCTG GTCAACGTCA AAGGCAAAAC GATGGTGGTC TACGGAACGC GCTGA
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Protein sequence | MVAISFTPKA NGLDKLLPHA ERRRCPAKTN IISAGDRSES LFFILKGTVT VLIEDDERRE MIVAYLNNGD FFGELGLFEQ PGHESVRSAW VRAKTECEVA EIPYETFREL TRKDPEILYA IGSQMAERLR NTTRKVGDLA FLDVTGRVAR TLLDLCKQPD AMTHPDGMQI KITRQEIGRI VGCSREMVGR VLKALEEQSL VNVKGKTMVV YGTR
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