| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0593 |
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| Symbol | trpD |
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| ID | 1182204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 652004 |
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| End bp | 653053 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391959 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | NP_790440 |
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| Protein GI | 28867821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.973159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATCA AAAGCGCGCT GAACCGCGTG GTCAACCAGC TGGACCTGTC CACTGACGAG
ATGCGCGACG TCATGCGCGA GATCATGACC GGCCAATGCA CCGAAGCGCA GATCGGTGCG
TTTCTGATGG GCATGCGCAT GAAGAGCGAG ACCATCGATG AAATCGTCGG TGCGGTTTCT
GTCATGCGTG AGCTGGCCGA CAAGGTTGAA CTGAAAACGC TGGATGGCGT TGTCGATATC
GTCGGCACTG GCGGTGACGG TGCGAACATT TTCAACGTGT CCACCGCGTC GGCTTTCGTG
ATTTCAGCGG CGGGCTGCAC GGTGGCCAAG CACGGCAACC GCGCGGTGTC GGGTAAAAGC
GGCAGTGCTG ATTTGCTGGA GGCGGCGGGG GTTTATCTGA ACCTGACGCC TGTCCAAGTG
GCGCGCTGCA TTGACAGCGT CGGCATCGGC TTCATGTTCG CCCAGTCGCA TCACAGCGCG
ATGAAACACA CGGCCGGCCC TCGCCGCGAG CTGGGGCTGC GCACACTGTT CAATATGCTC
GGTCCGTTGA CCAACCCGGC TGGCGTGCGT CATCAGGTTG TCGGCGTGTT CAATCAGGCA
CTGTGCCGCC CGCTGGCCGA AGTGCTGCTG CGTCTGGGCA GCAAGCATGT GCTGGTGGTG
CACTCGCAGG ACGGGCTGGA TGAATTCAGT CTGGCGGCGC CGACGTTCGT CGCTGAACTG
AAAAATGGCG AAGTGACGGA ATACTGGGTG CAGCCTGAAG ACCTGGGCAT CAAGAGCCAG
AGCCTGTATG GCCTGGCGGT GGAAAGTCCG GCGCAGTCGC TGGAGCTGAT TCGCGATGCT
CTGGGTCGGC GCAAGACCGA GATCGGGCAG AAGGCTGCGG AAATGATCGT GCTCAATGCC
GGTGCTGCGC TTTATGCTGC CGATCATGCG ACCAGCCTGA AAGAAGGCGT GGCGCTGGCC
CATGACGCAC TGCACACCGG CCTTGCGCGG GAAAAACTGG ATGAGTTGGG TGCCTTCACG
GCGGTATTCA AGCAGGAGAA CGAAGCATGA
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| Protein sequence | MNIKSALNRV VNQLDLSTDE MRDVMREIMT GQCTEAQIGA FLMGMRMKSE TIDEIVGAVS
VMRELADKVE LKTLDGVVDI VGTGGDGANI FNVSTASAFV ISAAGCTVAK HGNRAVSGKS
GSADLLEAAG VYLNLTPVQV ARCIDSVGIG FMFAQSHHSA MKHTAGPRRE LGLRTLFNML
GPLTNPAGVR HQVVGVFNQA LCRPLAEVLL RLGSKHVLVV HSQDGLDEFS LAAPTFVAEL
KNGEVTEYWV QPEDLGIKSQ SLYGLAVESP AQSLELIRDA LGRRKTEIGQ KAAEMIVLNA
GAALYAADHA TSLKEGVALA HDALHTGLAR EKLDELGAFT AVFKQENEA
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