| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0580 |
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| Symbol | |
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| ID | 1182191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 635214 |
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| End bp | 637358 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391947 |
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| Product | tail tape measure protein |
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| Protein accession | NP_790427 |
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| Protein GI | 28867808 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.834112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGACA CTATCAGAAC GCTGATTACC GGCGTCGACC AGCTGTCTCC AACGCTGGCA
ACTATCCGCA ACAACGTCAA AGGCCTCGAG ACCAGTCTGG GGGCCATAGA ACTTGGCAAG
GCGATCACGG ACAACGCTTT GGCGGGGCCT TTGATTGCCG GGGTAAAGGC AGCGATCGGT
TTCGAGACCA GCATGGCCGG CGTGAAACGG TCAGTTACCT TTGAAACACC GCAGCAATTT
CAGCAGATGG GGTCCGATAT TCTGGACCTC AGTGAACGGC TGCCGGAAAG CGCCAACGGC
ATCGCGGCGA TTGTTGCCGC CGGTGCCAAG GCCAATGTAC CGCGCGAAGA ACTGACCGGG
TTTGCCAGCG ATGCCGTGAA AATGGGGGTC GCCTTCGATC AGACGGCGGC CGAGTCGGGC
GACATGATGG CCTCGTGGCG ATCTTCGTTC CAGATGACTC AACCGCAAGT CGCGGCGCTG
TCCGAGAAGA TCAACGTGCT CGGCGGCAAC AATCTGGAAA AGAAAATTGC CACCATGGTC
ACCGCAATGG GCCCGCTCGG GCCGGTTGCG GGTCTGGCAT CCGGGCAACT GGCGGCGATG
GGCGCCACTT TGGCCAGCGT CGATGTACCG GCCGATGTGG CCGCCAGCGG CATGAAGCGC
TTCATGCAGT CGTTGACCGA AGGCGGCGCG GCGAAAGCGG GGGCGTTCGA GGCGTTGCAA
CTCGACGTCA ACCAGCTGAC CCAGGGCATG CAGAGCGACC CGTCCGGGAC CATTGAAAAG
GTCCTGACGG CTGTCTCAAG TGTTGACCCC GACAAACAGT CGGATGTCAT CACGCAACTG
TTCGGCGCTG AATCGCTGGG TGCGATTACA CCATTGCTGG CCAACCTCGA TGTGCTCAGG
TCCAACCTGG CCAAGGTCGG CGAGGGCGTG CAGAACAGCG GCACCCTCGA GAAGGAATTC
GCCGACAACT CGCAGACCAC GGCCACGGCC ATCAAAGAGA TGACCAACCG TGTCGATCGT
CTGGGCATCA ACATCGGCAG CATGTTTCTG CCTGCGATGA ACCAGGCAAT GGCCGTGATC
GGGCCGATGA TTTCTCAGGT CGCCGCACTG GCGGCCGAAC ACCCTGGCGT GATCAAGGGT
GTGGTGGCCG CTGCAATTGC GTTCGGCGTC TTGCAAGTTG CGGTAATGAC CGCAACGACT
GCCATGAGCG TACTGAGTGC GGTGATGGGC CTGTCACCGC TGGGCCTGAT CGTGCGCGGC
CTGGCGCTGG CGGCAGGTCT GCTGATCGCC AACTGGTCGA CCGTCGCGCC TTATTTTCAG
GCCGTTTGGG AGGCGATTCG CGGGCCGGCC ATGGCGCTGT GGGATGTACT CAAGGCGGTA
TTTGCCTGGA CGCCGATCGG CATGATCGTA GCCAACTGGC AGCCGTTATC CGAGTTTTTT
GCGGCGCTGT GGGATGTGAT CAAAGTGCTG GCCACGCCGT TTTCCGACTT CCTGCAGACG
CTGTTCTCGT GGACGCCGCT GGGCATGGTT GTGGCCAATT GGCAGCCAAT TTCCGAGTAC
TTCGCCGGCC TGTGGGAAAG CATCAAGACC GCTGCGCAGC CGTTTACCGA CGCGCTGGCA
ATGATGTTCA GTTTTTCGCC GCTGGGCATG GTTATCGAGA AATGGGCGCC GATCAAAGCC
TGGTTCGCGG ATTTGTGGGC AGACATCAAA CCGTTCATCG ACCCGATCAT GAGCTGGTTT
GGCGGCGACG GGGATAAGTC CTTGCTGAAA AGCGCCACCG AAAAGGTCAA TCAGTTCGCT
GAAGAGCAAC GGGTACGCAA CGCAGGGCCT GGTGGCGGAA CCGGGGCGTT TCTGGCTGCA
AATGCGGTTG ACGCCAGTCG CTCGCAACAG CAGCAGCTCA ACCTGGCGAC CGGAGTGCCG
CCGACCAGTC AATTGCTCAG TGCGCCAAAC TTTCCAGCCC CCGGCAACCT GTTGCTGCAA
CAGGGTGCTG CGGGGGCCGG CGCGCGGCTT GAAGGCGAAC TCAATATTCG CTTTGAAAAC
GCACCGCCTG GCATGCGTCC GGGACAAGTG CAAAGCAACC AGCCGGGTTT GACGATTTCG
CCAAACGTCG GTTATCGAAC CCTCGGCGCA GGAGCCGGAT TATGA
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| Protein sequence | MADTIRTLIT GVDQLSPTLA TIRNNVKGLE TSLGAIELGK AITDNALAGP LIAGVKAAIG
FETSMAGVKR SVTFETPQQF QQMGSDILDL SERLPESANG IAAIVAAGAK ANVPREELTG
FASDAVKMGV AFDQTAAESG DMMASWRSSF QMTQPQVAAL SEKINVLGGN NLEKKIATMV
TAMGPLGPVA GLASGQLAAM GATLASVDVP ADVAASGMKR FMQSLTEGGA AKAGAFEALQ
LDVNQLTQGM QSDPSGTIEK VLTAVSSVDP DKQSDVITQL FGAESLGAIT PLLANLDVLR
SNLAKVGEGV QNSGTLEKEF ADNSQTTATA IKEMTNRVDR LGINIGSMFL PAMNQAMAVI
GPMISQVAAL AAEHPGVIKG VVAAAIAFGV LQVAVMTATT AMSVLSAVMG LSPLGLIVRG
LALAAGLLIA NWSTVAPYFQ AVWEAIRGPA MALWDVLKAV FAWTPIGMIV ANWQPLSEFF
AALWDVIKVL ATPFSDFLQT LFSWTPLGMV VANWQPISEY FAGLWESIKT AAQPFTDALA
MMFSFSPLGM VIEKWAPIKA WFADLWADIK PFIDPIMSWF GGDGDKSLLK SATEKVNQFA
EEQRVRNAGP GGGTGAFLAA NAVDASRSQQ QQLNLATGVP PTSQLLSAPN FPAPGNLLLQ
QGAAGAGARL EGELNIRFEN APPGMRPGQV QSNQPGLTIS PNVGYRTLGA GAGL
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