| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0568 |
|---|
| Symbol | trpE |
|---|
| ID | 1182178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 623639 |
|---|
| End bp | 625120 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637391935 |
|---|
| Product | anthranilate synthase, component I |
|---|
| Protein accession | NP_790415 |
|---|
| Protein GI | 28867796 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | [TIGR00564] anthranilate synthase component I, non-proteobacterial lineages |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTG AAGAATTCCT GCGTTTGGCT GCTGATGGCT ACAACCGCAT CCCGCTTGCC
CGCGAAACCC TGGCTGACTT CGACACGCCG CTGTCGATCT ACCTCAAGCT TGCCGATCAG
CCGAACTCCT ACTTGCTGGA ATCGGTGCAG GGCGGTGAGA AATGGGGTCG TTACTCGATC
ATCGGCCTGC CTTGCCGCAC TGTGATGCGC GTACATGGCC ATCACGTCAG CGTGACCCAC
GATGGCGTCG AGATCGAAAG CCTGGACGTT GAAGACCCGC TGGACTTCGT CGAGACCTTC
AAAGCGCGCT ACAACGTGCC GACCATCGCC GGTCTGCCGC GTTTCAATGG CGGGTTGGTC
GGTTATTTCG GTTATGACTG CGTGCGTTAC GTCGAAAAGC GTCTTGCCAA CTGCCCGAAC
CCTGACCCGC TGGGCGTACC GGATATCCTG TTGATGGTGT CCGATGCCGT GGTGGTATTC
GACAATTTGG CGGGCAAGAT GCACGCCATC GTATTGGTCG ACCCGGCGCA GCAGGACGCT
TACGACAGTG GCGCTGCACT GCTTGATGAG CTGATGCACA AGCTGCGTCA GCCGATCACA
CCGCGTCGTG GCCTGGATCT GGACCGGCCT CCGGCTGCCG ACCCGGTGTT TCGCTCAAGC
TTCACGCAGA ATGATTACGA AACCGCAGTC GACACGATCA AGCAGTACAT CCTGGCGGGC
GACGTGATGC AGGTCGTGCC ATCGCAACGC ATGTCCATCG ATTTTGCTGC AGCGCCCATT
GACCTGTACC GTGCGCTGCG CTGCTTCAAC CCGACGCCGT ACATGTATTT CTTTAACTTC
GGCGACTTCC ACGTTGTCGG CAGTTCGCCG GAAGTGCTGG TGCGCGTCGA GGACAACCTG
ATCACGGTTC GGCCAATCGC CGGTACGCGT CCGCGCGGGG CTACTGAAGA AGCGGATCGT
GCGCTGGAAG AGGATCTGCT GTCCGATCAC AAGGAGATCG CCGAGCACTT GATGCTGATC
GATCTGGGTC GTAATGACGT CGGGCGGGTG TCCGGGATCG GTACGGTCAA ATTGACCGAG
AAGATGGTTA TCGAGCGTTA CTCCAACGTG ATGCACATTG TTTCCAACGT CACTGGCGAG
CTGAAAAGCG GGCTGACGGC GATGGATGCA CTGCGGGCGA TTCTGCCGGC CGGCACCTTG
TCCGGTGCGC CGAAAATCCG CGCCATGGAA ATCATCGACG AGCTGGAGCC GGTCAAGCGT
GGCGTCTACG GCGGGGCGGT GGGGTACATG GCGTGGAACG GCAACATGGA CACCGCCATC
GCAATTCGTA CGGCGGTGAT CAAGAACGGT GAGCTGCACG TGCAGGCTGG CGGCGGTATC
GTCGCCGACT CGGTGCCAGC ACTGGAGTGG GAAGAAACCC TCAACAAACG CCGCGCCATG
TTCCGTGCCG TGGCTTTGGC TTCGCAGACT GCCGAGGGTT GA
|
|---|
| Protein sequence | MNREEFLRLA ADGYNRIPLA RETLADFDTP LSIYLKLADQ PNSYLLESVQ GGEKWGRYSI
IGLPCRTVMR VHGHHVSVTH DGVEIESLDV EDPLDFVETF KARYNVPTIA GLPRFNGGLV
GYFGYDCVRY VEKRLANCPN PDPLGVPDIL LMVSDAVVVF DNLAGKMHAI VLVDPAQQDA
YDSGAALLDE LMHKLRQPIT PRRGLDLDRP PAADPVFRSS FTQNDYETAV DTIKQYILAG
DVMQVVPSQR MSIDFAAAPI DLYRALRCFN PTPYMYFFNF GDFHVVGSSP EVLVRVEDNL
ITVRPIAGTR PRGATEEADR ALEEDLLSDH KEIAEHLMLI DLGRNDVGRV SGIGTVKLTE
KMVIERYSNV MHIVSNVTGE LKSGLTAMDA LRAILPAGTL SGAPKIRAME IIDELEPVKR
GVYGGAVGYM AWNGNMDTAI AIRTAVIKNG ELHVQAGGGI VADSVPALEW EETLNKRRAM
FRAVALASQT AEG
|
|---|
| |