| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0563 |
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| Symbol | |
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| ID | 1182173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 618732 |
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| End bp | 619766 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391930 |
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| Product | polyamine ABC transporter, periplasmic polyamine-binding protein |
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| Protein accession | NP_790410 |
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| Protein GI | 28867791 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAGT CTTTGAAGTT CACCGCCATC ACGTTGGGCC TGATGTGCGC CGCGCAAGCC
ATGGCCGCCA CCGACCTGAC CGTCATTTCC TTCGGCGGTG CCAACAAGGC CGCTCAGGAA
AAAGCGTTCT ATGCGCCGTG GGAAAAGGCC GGCAACGGCA AGATCATTGC CGGTGAGTAC
AACGGTGAAA TGGCCAAGGT CAAAACCATG GTCGACACCA AGAGCGTTTC CTGGGACCTG
GTAGAAGTTG AATCGCCGGA GCTGGCTCGC GGCTGCGATG AAGACATGTT CGAAGAGCTG
GACCCGAAAC TGCTCGGCAA TGCCGCTGAC TTCGTGCCTG GCGCCATCAC CACCTGCGGT
GCGGGCTTCT TCGTCTGGTC CACCGTGCTG GCCTACAACG CCGACAAGGT TGCCAGCGCG
CCAAGCGGCT GGGTCGATTT CTGGGACACC AAGAAATTCC CTGGCAAGCG CGGCCTGCGC
AAAGGCGCCA AATACACCCT GGAATTCGCG TTGATGGCCG ACGGCGTTGC GCCGAAAGAC
GTCTACAAAG TGCTGGCCAG CAAAGACGGT CAGGACCGTG CGTTCAAGAA ACTCGATGAG
CTCAAGCCAA ACATCCAGTG GTGGGAAGCC GGCGCACAGC CGCCGCAGTA CCTCGCTTCC
GGTGACGTGG TGATGAGCTC GGCCTACAAC GGCCGTATCG CTGCCGTGCA GAAAGAAAGC
AACCTGAAAG TGGTCTGGAC CGGCGGCGTA TACGACTTCG ATGCCTGGGC GATTCCAAAG
GGCTCGAAAA ACGCCGATGC AGCAAAGAAA TTCATCGCTT TCATGCTGAG CCCGGAGCAA
CAGAAAACTT ACTCGCAGAA CATCGCCTAC GGCCCGGCCA ACACCCAGGC GGTCAAGCTG
CTGGATAAGG AAACGCTGCA GAACATGCCC ACCACACCTG AGAACATCAA GGATCAGGTG
CAGATGGACG TGGCGTTCTG GACCGACAAC GGCGAATCCC TCGAGCAGCG TTTCACTGCC
TGGGCTGCCA AGTAA
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| Protein sequence | MLKSLKFTAI TLGLMCAAQA MAATDLTVIS FGGANKAAQE KAFYAPWEKA GNGKIIAGEY
NGEMAKVKTM VDTKSVSWDL VEVESPELAR GCDEDMFEEL DPKLLGNAAD FVPGAITTCG
AGFFVWSTVL AYNADKVASA PSGWVDFWDT KKFPGKRGLR KGAKYTLEFA LMADGVAPKD
VYKVLASKDG QDRAFKKLDE LKPNIQWWEA GAQPPQYLAS GDVVMSSAYN GRIAAVQKES
NLKVVWTGGV YDFDAWAIPK GSKNADAAKK FIAFMLSPEQ QKTYSQNIAY GPANTQAVKL
LDKETLQNMP TTPENIKDQV QMDVAFWTDN GESLEQRFTA WAAK
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