| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0562 |
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| Symbol | |
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| ID | 1182172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 617525 |
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| End bp | 618649 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391929 |
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| Product | polyamine ABC transporter, ATP-binding protein |
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| Protein accession | NP_790409 |
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| Protein GI | 28867790 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG TCGATACAAG CGCTGGAGCG AGTGATGTTC TGGTCAGCTT TCGTGGTGTG
CAGAAGAGCT ACGACGGCGA AGCACTGATC GTCAAAGACC TCAATCTGGA CATTCGCAAA
GGCGAATTCC TCACCCTGCT CGGGCCTTCC GGCTCCGGCA AGACCACCAG CCTGATGATG
CTGGCCGGCT TCGAAACACC GACCGCTGGC GAAATTCTGC TCGGTGGCCG CGCCATCAAC
AACGTGCCGC CGCACAAGCG TGACATCGGC ATGGTGTTCC AGAACTACGC TTTGTTTCCG
CACATGACGG TTGCCGAGAA CCTCGCGTTC CCGCTGTCGG TGCGTGGCAT GAGCAAGACC
GACGTCGGCG AAAAAGTCAA AAAGGCTCTG GGCATGGTCC AGCTCGACAC GTTTGCGCAT
CGCTACCCGG CGCAGCTGTC CGGTGGCCAG CAGCAACGTG TAGCTCTGGC GCGCGCGTTG
GTGTTCGAGC CACAACTGGT GCTGATGGAT GAGCCGCTCG GCGCGCTCGA CAAACAACTG
CGCGAACACA TGCAGATGGA GATCAAGCAT CTGCACCAGC GCCTCGGTGT GACAGTGGTC
TACGTGACCC ACGACCAGGG TGAAGCACTG ACCATGTCCG ACCGGGTTGC GGTCTTCCAT
CAAGGTGAGA TCCAGCAGAT CGCGCCGCCA CGCAGCCTGT ACGAAGAGCC GAAAAACACC
TTCGTAGCCA ATTTCATCGG CGAGAACAAT CGACTCAACG GGCGTCTGGT CAGCCAGGAC
GGCGACCGCT GCGTGGTCGA GCTGGAGCGC GGCGAGAAAG TGCACGCACT GGCGATCAAC
GTCGGTCGGC CGGGTGGCCC GGTGACGCTG TCCATTCGCC CCGAACGCAT CAACCTCAAT
GGCCGCAGCG AAAGCTGTGT GAACCGTTTC TCTGGTCGAG TGGCCGAGTT TATCTACCTC
GGCGACCACG TCCGTGTGCG TCTGGAAGTT GCCGGCAAGA CTGACTTCTT CGTCAAGCAG
CCGATTGCCG AGCTGGACCC GACGCTGAGT GTGGGTGACG TTGTGCCGAT CGGTTGGCAA
GTCGAGCACG TGCGTGCGCT CGATCCCCTG CAGCAAGAGC ATTGA
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| Protein sequence | MSDVDTSAGA SDVLVSFRGV QKSYDGEALI VKDLNLDIRK GEFLTLLGPS GSGKTTSLMM
LAGFETPTAG EILLGGRAIN NVPPHKRDIG MVFQNYALFP HMTVAENLAF PLSVRGMSKT
DVGEKVKKAL GMVQLDTFAH RYPAQLSGGQ QQRVALARAL VFEPQLVLMD EPLGALDKQL
REHMQMEIKH LHQRLGVTVV YVTHDQGEAL TMSDRVAVFH QGEIQQIAPP RSLYEEPKNT
FVANFIGENN RLNGRLVSQD GDRCVVELER GEKVHALAIN VGRPGGPVTL SIRPERINLN
GRSESCVNRF SGRVAEFIYL GDHVRVRLEV AGKTDFFVKQ PIAELDPTLS VGDVVPIGWQ
VEHVRALDPL QQEH
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