| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0559 |
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| Symbol | |
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| ID | 1182169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 614343 |
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| End bp | 616358 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391926 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_790406 |
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| Protein GI | 28867787 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCATTC GTCTTCTGCG CACCGGTTTT ATCGGCTGCA TGGCTTTGCT CTTGATGGTT
CACATGGCGA ATACACAGGC CGATGAGCCG CAATCGCCTG CGCTTGCGCA ACTGAGCCCG
GCACAGCGTG GCTGGCTCGA TCAGCATGGG CCGTTGCGGG TTGGTCTGGT GCTGCGTGCG
CCTTACGCCC AGTTTGATCA GCGTTTGCAG CAACTGTCCG GCGCTAACGT CGACCTGATG
AACGCGCTGG CGGCAACGCT GCCTGTCGAG TTGCTGTGGC GAAACTTTGT CGATCAGGCC
TCACTGGAAA AAGCCCTGAG CAACGGAGAA ATCGACGTCG CCCCCGGCTT GATGCAGACC
CCGGCGGGTT TGCGTCTGTG GTTGTTTTCC GATCCGTATC TGCGCGTATC GCAACTGTTG
ATCGGTGAAC GTGACGGCAG CACCGCCGTG GACCTGGAAA AACTCGACAG CCTTTCCAGG
GTCGCGGTGC GTATGCCAAG CGCTACTGCC GATTACCTGC GCAGCAATTT TCCGCACCTG
AACCTGCAAG GGGTGCCGCT GGAGCGTCAG GCGCTGCAAT TGCTGCTCAG CCAGCAGGCA
CGCTATGCCG TGGTGGATGA AGCACAACTC AGTCGCTTGC TGCGTGAGCC GGAGTTTGCC
GGGCTGGCGG TGGTCGGCGA TACCGGCCTG CCACAACTGT TGCGTGTGGC GTCACGCCGC
GACGCGCCAG AGCTGGCGGC GATCGTCAGC GAAGCCTTGC GGGCGGTTCC TGCCAAGGAG
CTGGAGCAAC TGCATGCGCG CTGGATGCCG CTGACCCCGT CGCACTTCAG TGAATCGACG
AAGCTCTGGA AAAACCTGTG CATTTTACTG TTGGTGATGC TGCTGGCCTG TTTCGCCATC
GTGATCTGGC AGCGCCGTCA GCAGCAGGCG CTGGAGCAGG AACTGCTGGC CGGGCGTGAA
CATCTGGCCC GTCGCGTTGC AAGCGAAGAG GCGCTGCGAC TGGCACAATT CTCCATTGAT
CAGAGCACCG TCGGTATTCT CTGGGTCAAT TGGGACAGTC GCGTGCGCTA TGCCAACCGG
GCGGTGGAAT CCATGTTGGG CTATGCGCCG GGGCAAGTGG TCGAGCGTCC GCTGATCGAC
TTCGAGCCCG ACCTGCACAT GGACCGCTGG CTTAATCTGT GGAAGAACGC ACGCTCCAGT
GAGGACAGTG CGCAGGTGTT CGAGACCCAC TGCCTGCGCG CCGATGGCAG TCTTCTGCCT
GCCGATGTCT CGCTGAGCTT CCTGCGTTTT CGTGATGCGG AATACCTGGT GGTGTTTCTC
AGTGATGTCA GCGAACGACG CCGCGCTCAC GATCAGTTGC GTGAACTGTC GGCGCACCTG
GAAAGCGTGC GTGAAGAAGA GAAGGCGCGT ATTGCCAGGG AAGTTCATGA CGAGCTGGGT
CAGATGCTGA CCGTCTTGAA GCTGGAAACA TCCATGTGCG AGCTGGCGTA TGCCGATCTT
GACCCAGGCT TGAGCGAACG TCTGGACAGC ATGAAGCGCC TTATTTCTCA ATTGTTTCAA
CTGGTGCGAG ACGTCGCCAC TGCATTGCGG CCACCGATTC TCGACGCTGG CATCGCTTCC
GCTATCGAGT GGCAAGCGCG CCGTTTCGAG GCGCGTACGC AGATTCCTTG TCTGGTGCAG
GTGCCGGACA ACCTCCCGGC GCTTAGTGAT GCCAGGGCCA CGGGCATGTT CCGGATTCTT
CAGGAGGCGC TGACCAACGT CATGCGCCAC GCTCAGGCGC ACACGGTGGA GATCAGCCTG
ACGCTGCAAG ACGGCATGAT GTGCATGACC GTCGCCGATG ACGGTCAGGG GTTTGTCGTC
GAGTCGGGCA GGGCGGTTTC ATTCGGTCTG GTCGGGATGC GCGAGCGGGT GTTGATGCTG
GGCGGCAGAC TGGAACTGGA CAGCGAGGCC GGTGAAGGCA CAACCTTGCG CGCCTACATT
CCGTTGGACC CCACCGCACA GGAGCGAAGC CAGTGA
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| Protein sequence | MIIRLLRTGF IGCMALLLMV HMANTQADEP QSPALAQLSP AQRGWLDQHG PLRVGLVLRA
PYAQFDQRLQ QLSGANVDLM NALAATLPVE LLWRNFVDQA SLEKALSNGE IDVAPGLMQT
PAGLRLWLFS DPYLRVSQLL IGERDGSTAV DLEKLDSLSR VAVRMPSATA DYLRSNFPHL
NLQGVPLERQ ALQLLLSQQA RYAVVDEAQL SRLLREPEFA GLAVVGDTGL PQLLRVASRR
DAPELAAIVS EALRAVPAKE LEQLHARWMP LTPSHFSEST KLWKNLCILL LVMLLACFAI
VIWQRRQQQA LEQELLAGRE HLARRVASEE ALRLAQFSID QSTVGILWVN WDSRVRYANR
AVESMLGYAP GQVVERPLID FEPDLHMDRW LNLWKNARSS EDSAQVFETH CLRADGSLLP
ADVSLSFLRF RDAEYLVVFL SDVSERRRAH DQLRELSAHL ESVREEEKAR IAREVHDELG
QMLTVLKLET SMCELAYADL DPGLSERLDS MKRLISQLFQ LVRDVATALR PPILDAGIAS
AIEWQARRFE ARTQIPCLVQ VPDNLPALSD ARATGMFRIL QEALTNVMRH AQAHTVEISL
TLQDGMMCMT VADDGQGFVV ESGRAVSFGL VGMRERVLML GGRLELDSEA GEGTTLRAYI
PLDPTAQERS Q
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