Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0557 |
Symbol | |
ID | 1182167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 612447 |
End bp | 613214 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637391924 |
Product | DnaJ-like protein DjlA, putative |
Protein accession | NP_790404 |
Protein GI | 28867785 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1076] DnaJ-domain-containing proteins 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTGGC CCGGCACACT GATTGGCGCT GGCGTAGGTT ATACGATCGC CAGTATTCCG GGCGCCATGC TCGGGGCGCT ACTGGGGCAG GCGCTGGATC GGCGGCTCAA GCTGCAGAGC TGGGCGCACC TGCGCGAACG TCTCGGCGGG CGGGCAGCGA TACCTGAGGA CGAGCTGTTG TTCGTGCTGC TGGGTCGTCT GGCCAAGAGT GACGGGCGGG TTGTGGCCAG TCATATCCAG CAGGCACGTG CCGAGATGCG CCGCATCAAT CTGAAAGAAG CCGACCAGTT GCGCGCTATC AATGCGTTCA AGCGTGGCCG TGATGGCGCC GACGGCCTGC GCACTTACCT GCGTGGCTTG CAGGGGCAGT CGGACATTGC CGAGGATATG TTACGTGCCT GCTGGCGCAT GGCCTGGGCG GATGGCAAGG CTTCGCGGGT CAAGCGCGAA CTGATCGGGG TGTGGGGCAT GTGGCTGGGC TGGTCGCAAC AGCAGGTTGA AGCGCTGGCG GCTGATCATG ACCCTATGAA GCGTGCTCCC CTCAGCAGCG GCGATGACTA CATGGGGGCG ATGGCCTTGC TGGGGATAAA ACCGGACACC GACCCGTTGA GCATCAAGCG CGCTTATCGG CGGCTGCTCA GTCGGCATCA CCCGGACAAG ATTGCAGGCT CGGGTGCCAA CGCGCAGCAA GTGCGGGTGG CGACCGAGAA AACCAGCGAG TTGCACAATG CCTATCGGGT GGTGAAGGCG CGCCGCGGCT TTGCATGA
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Protein sequence | MLWPGTLIGA GVGYTIASIP GAMLGALLGQ ALDRRLKLQS WAHLRERLGG RAAIPEDELL FVLLGRLAKS DGRVVASHIQ QARAEMRRIN LKEADQLRAI NAFKRGRDGA DGLRTYLRGL QGQSDIAEDM LRACWRMAWA DGKASRVKRE LIGVWGMWLG WSQQQVEALA ADHDPMKRAP LSSGDDYMGA MALLGIKPDT DPLSIKRAYR RLLSRHHPDK IAGSGANAQQ VRVATEKTSE LHNAYRVVKA RRGFA
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