| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0556 |
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| Symbol | |
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| ID | 1182166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 611814 |
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| End bp | 612446 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391923 |
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| Product | nucleotidyltransferase family protein |
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| Protein accession | NP_790403 |
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| Protein GI | 28867784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCGT TGACCCTGCA TACACCCAAG CCGCTGGTGC GTGCGGGCGG CATTCCGTTG
ATCGAGTACC ACCTGAACGC CTTACGTGCA GCAGGGTTTC ACCAATTGGT GATCAACCAT
GCGTGGCTGG GCCAGCAGAT CGAGGATTAC CTGGGGGACG GTCAGCGTTT CGACCTGAGC
ATCCGCTATT CCGCCGAAGG TCAGCCGCTG GAAACCGGCG GCGGTATCCA GCGGGCGCTG
CCACTGCTGG GCGCCGAGCC TTTTGTGGTG GTCAATGGTG ATGTCTGGAC CGATTACGAT
TTCGGCGCAT TGCGCATGCC GCTTGCCGGC CTGGCGCATC TGGTGCTGAT CGACAACCCC
GCACACCACC CCACCGGCGA TTTTTCGCTG GTCGACGGCC AGGTGCGCGA TGACGATTCG
GCTGGCCTGC GCCTGACCTA CAGCGGCATC GCCATCCTGC ATCCGCAACT GTTTGCCGAC
TGCGAGCCTG GTGCCTTCAA GCTTGCGCCG TTGTTGCGCG AGGCCATGCA TCAAGGGCTG
GTAACGGGTG AGCACTTCAA AGGGCGCTGG GTCGATGTCG GCACCCATGA ACGCCTGGCA
GAAGTCGAGC AGTTGCTTGC GGAGACGCGC TGA
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| Protein sequence | MRPLTLHTPK PLVRAGGIPL IEYHLNALRA AGFHQLVINH AWLGQQIEDY LGDGQRFDLS
IRYSAEGQPL ETGGGIQRAL PLLGAEPFVV VNGDVWTDYD FGALRMPLAG LAHLVLIDNP
AHHPTGDFSL VDGQVRDDDS AGLRLTYSGI AILHPQLFAD CEPGAFKLAP LLREAMHQGL
VTGEHFKGRW VDVGTHERLA EVEQLLAETR
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