Gene PSPTO_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0555 
Symbol 
ID1182165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp610670 
End bp611695 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content57% 
IMG OID637391922 
Producthypothetical protein 
Protein accessionNP_790402 
Protein GI28867783 
COG category[R] General function prediction only 
COG ID[COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATC AAGATATACG CCTGCAATCG CTGAAAGTTT GGCTCGATGA GCAGTTGCCA 
GCGCTGTTTG CGGCGCAAAA TTGGGGCGCT GTGCCCCCGG CCACGTTGAC TGCGGCCAGC
AGTGACGCAA GTTTTCGTCG TTATTTTCGC TGGGAGGGTG GGGCCCGAAC TTTTATTGTC
ATGGACGCCC CTCCACCGCA GGAAAACTGC AAACCGTTTG TGGATATCGC TCATTTATTG
GAAAAGTCGG GCATTAATGT TCCAAAAATT TATGCCGAAG ACCTGACGCA AGGCTTTTTG
CTGCTCAACG ATCTGGGCCG TCAGACCTAT CTGGATGTGA TTGACGCGGA CAACGCCGAT
GGGTTGTTTG CCGAAGCGAT CGAGGCGCTG CTGGCTTTCC AGCAATTGCC GATGGACGCG
CCGCTGCCCA GCTATGACGA AGCCTTGCTG CGTCGTGAGC TGGAGCTGTT CCCTGAGTGG
TACGTGAAGC GCCATCTGGG TGTCGAGATG GACGAGGCGC AACTGGCCGA CTGGCAGCAG
GTCAGCCAGT TGCTGATCAA CAGCGCCCTG GCACAACCCA AAGTGCTGGT GCACCGCGAC
TACATGCCCC GCAACCTGAT GATCAGCGAA CCCAACCCCG GCGTTCTGGA TTTTCAGGAC
GCTGTGTACG GGCCGGTCAC CTACGACGTG ACGTGCCTGT TCAAGGACGC ATTTTTGAGC
TGGCCGCAAG AGCGCGTCAG CGACTGGCTC AGGACTTACT GGGATCAGGC GCGTACGCTG
GGTATCCCGG TGCAGGAGGA TTTTGCAGCT TTCGAGCGCG CCAGTGATCT GATGGGCGTA
CAGCGTCATC TGAAGGTGAT CGGGATTTTC GCGCGGATCT GTCATCGCGA CGGCAAGCCC
CGCTATCTGG CAGATGTCCC GCGCTTTTTT GCCTACATAG AAGCGGTGTT GTCGAAGCGC
CCGGAGCTGG CCCAATTGGG TCAATTGCTG ACCAGTTTGC AGCAGCCGGC AGAAACAGCT
GTCTGA
 
Protein sequence
MSDQDIRLQS LKVWLDEQLP ALFAAQNWGA VPPATLTAAS SDASFRRYFR WEGGARTFIV 
MDAPPPQENC KPFVDIAHLL EKSGINVPKI YAEDLTQGFL LLNDLGRQTY LDVIDADNAD
GLFAEAIEAL LAFQQLPMDA PLPSYDEALL RRELELFPEW YVKRHLGVEM DEAQLADWQQ
VSQLLINSAL AQPKVLVHRD YMPRNLMISE PNPGVLDFQD AVYGPVTYDV TCLFKDAFLS
WPQERVSDWL RTYWDQARTL GIPVQEDFAA FERASDLMGV QRHLKVIGIF ARICHRDGKP
RYLADVPRFF AYIEAVLSKR PELAQLGQLL TSLQQPAETA V