Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0555 |
Symbol | |
ID | 1182165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 610670 |
End bp | 611695 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637391922 |
Product | hypothetical protein |
Protein accession | NP_790402 |
Protein GI | 28867783 |
COG category | [R] General function prediction only |
COG ID | [COG3178] Predicted phosphotransferase related to Ser/Thr protein kinases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGATC AAGATATACG CCTGCAATCG CTGAAAGTTT GGCTCGATGA GCAGTTGCCA GCGCTGTTTG CGGCGCAAAA TTGGGGCGCT GTGCCCCCGG CCACGTTGAC TGCGGCCAGC AGTGACGCAA GTTTTCGTCG TTATTTTCGC TGGGAGGGTG GGGCCCGAAC TTTTATTGTC ATGGACGCCC CTCCACCGCA GGAAAACTGC AAACCGTTTG TGGATATCGC TCATTTATTG GAAAAGTCGG GCATTAATGT TCCAAAAATT TATGCCGAAG ACCTGACGCA AGGCTTTTTG CTGCTCAACG ATCTGGGCCG TCAGACCTAT CTGGATGTGA TTGACGCGGA CAACGCCGAT GGGTTGTTTG CCGAAGCGAT CGAGGCGCTG CTGGCTTTCC AGCAATTGCC GATGGACGCG CCGCTGCCCA GCTATGACGA AGCCTTGCTG CGTCGTGAGC TGGAGCTGTT CCCTGAGTGG TACGTGAAGC GCCATCTGGG TGTCGAGATG GACGAGGCGC AACTGGCCGA CTGGCAGCAG GTCAGCCAGT TGCTGATCAA CAGCGCCCTG GCACAACCCA AAGTGCTGGT GCACCGCGAC TACATGCCCC GCAACCTGAT GATCAGCGAA CCCAACCCCG GCGTTCTGGA TTTTCAGGAC GCTGTGTACG GGCCGGTCAC CTACGACGTG ACGTGCCTGT TCAAGGACGC ATTTTTGAGC TGGCCGCAAG AGCGCGTCAG CGACTGGCTC AGGACTTACT GGGATCAGGC GCGTACGCTG GGTATCCCGG TGCAGGAGGA TTTTGCAGCT TTCGAGCGCG CCAGTGATCT GATGGGCGTA CAGCGTCATC TGAAGGTGAT CGGGATTTTC GCGCGGATCT GTCATCGCGA CGGCAAGCCC CGCTATCTGG CAGATGTCCC GCGCTTTTTT GCCTACATAG AAGCGGTGTT GTCGAAGCGC CCGGAGCTGG CCCAATTGGG TCAATTGCTG ACCAGTTTGC AGCAGCCGGC AGAAACAGCT GTCTGA
|
Protein sequence | MSDQDIRLQS LKVWLDEQLP ALFAAQNWGA VPPATLTAAS SDASFRRYFR WEGGARTFIV MDAPPPQENC KPFVDIAHLL EKSGINVPKI YAEDLTQGFL LLNDLGRQTY LDVIDADNAD GLFAEAIEAL LAFQQLPMDA PLPSYDEALL RRELELFPEW YVKRHLGVEM DEAQLADWQQ VSQLLINSAL AQPKVLVHRD YMPRNLMISE PNPGVLDFQD AVYGPVTYDV TCLFKDAFLS WPQERVSDWL RTYWDQARTL GIPVQEDFAA FERASDLMGV QRHLKVIGIF ARICHRDGKP RYLADVPRFF AYIEAVLSKR PELAQLGQLL TSLQQPAETA V
|
| |