Gene PSPTO_0547 details

Gene Information

• Locus tag: PSPTO_0547
• ID: 1182157
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 600744
• End bp: 602666
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637391914
• Product: hypothetical protein
• Protein accession: NP_790394
• Protein GI: 28867775
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2766] Putative Ser protein kinase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATAT TCAGCCACTT CAAAGACCGC TTTGAAAGCA CACGCCAGGA AGAGCTTTCG 
CTACAGGAGT ATCTTGAGCT CTGCAAACAG GATCGCAGCG CCTACGCCTC TGCCGCAGAA 
CGTCTGCTGT TGGCCATTGG CGAGCCCGAG CTGGTGGACA CTTCCGCCAA TTCACGGTTG 
TCGCGAATTT TCTCCAACAA GGTCATACGC CGCTATCCGG CCTTTGCTGA TTTCCACGGG 
ATGGAAGAAT GCATCGACCA GATCGTTTCG TATTTCCGCC ATGCCGCCCA AGGCCTGGAA 
GAGAAAAAAC AAATCCTTTA TCTGCTCGGC CCGGTAGGTG GCGGTAAATC GTCTCTGGCG 
GAAAAACTCA AACAACTGAT CGAAAAAGTA CCGTTCTACG CCATCAAGGG CTCACCCGTT 
TTCGAGTCGC CCCTGGGCCT GTTCAACGCC AGTGAAGACG GTGCGATTCT GGAAGAAGAC 
TTCGGGATCC CGCGGCGCTA CCTGAGCACC ATCATGTCGC CCTGGGCGAC CAAGCGTCTG 
GCTGAGTTCG GGGGCGACAT CAGCCAGTTC AAGGTCGTTA AGCTTTACCC CTCAGTGCTC 
AACCAGATTG CCGTGGCCAA GACCGAGCCA GGTGATGAGA ACAACCAGGA TATTTCCGCG 
CTGGTCGGCA AGGTTGATAT CCGCAAGCTG GAAGAATTCC CACAGAACGA CGCCGATGCC 
TACAGCTACT CTGGCGCGCT GTGCCGGGCC AACCAGGGCC TGATGGAATT CGTCGAGATG 
TTCAAGGCGC CGATCAAGGT TCTTCACCCG CTACTGACCG CCACGCAGGA AGGTAACTAC 
AACAGTACCG AGGGGCTGGG CGCGATTCCG TTCACCGGTA TTCTGCTCGC CCACTCCAAC 
GAATCGGAAT GGCACAGCTT CCGCAACAAC AAGAAAAACG AAGCCTTCAT CGACCGTATC 
TACATCGTCA AGGTGCCTTA CTGCCTGCGC GTCAGTGACG AGATCAAGAT TTACGACAAG 
CTGTTGTTCA ACAGCTCGCT GGCCAAGGCG CATTGCGCCC CCGACACCCT GAAAATGCTC 
GCGCAGTTCA CCACGCTGTC GCGCCTCAAA GAGCCGGACA ACTCCAACAT CTATTCCAAG 
ATGCGCGTGT ACGACGGCGA GAACCTGAAG GATACCGATC CAAAGGCCAA GTCGATTCAG 
GAATACCGCG ACAGCGCAGG CGTCGACGAA GGCATGAACG GCCTGTCCAC CCGCTTTGCG 
TTCAAGATTC TGTCCAAGGT TTTCAACTTC GACCCGCACG AAATCGCTGC CAACCCGGTG 
CACTTGCTCT ATGTGCTGGA ACAGCAGATC GAACAGGAGC AATTCCCTGC CGAAACGCGC 
GAACGCTATC TGCGCTTCAT CAAGGAATAC CTGGCACCTC GCTACATCGA GTTCATTGGC 
AAGGAAATCC AGACCGCGTA CCTGGAGTCC TACAGCGAAT ACGGCCAGAA CATCTTCGAC 
CGTTACGTGC TGTATGCAGA CTTCTGGATT CAGGACCAGG AATACCGCGA CCCTGAAACC 
GGCGAGATTC TCAATCGCGT CGCCTTGAAC GAGGAACTGG AGAAGATCGA AAAACCGGCC 
GGCATCAGCA ACCCGAAAGA TTTCCGCAAC GAAATCGTCA ACTTCGTGCT GCGCGCCCGC 
GCCAACAACA ATGGCAAGAA CCCGATCTGG CTCAGCTACG AGAAGCTGCG GGTGGTGATC 
GAGAAGAAAA TGTTCTCCAA CACCGAGGAC CTGCTGCCGG TTATCAGCTT CAACGCCAAG 
GCCAGCAAAG AGGATCAACA GAAACACAAC GACTTCGTCA CACGAATGGT CGAGAGGGGC 
TACACGGACA AGCAGGTACG TCTGCTTTCC GAATGGTATC TGCGCGTGCG GAAATCGCAG 
TAA 

 

Protein sequence

MSIFSHFKDR FESTRQEELS LQEYLELCKQ DRSAYASAAE RLLLAIGEPE LVDTSANSRL 
SRIFSNKVIR RYPAFADFHG MEECIDQIVS YFRHAAQGLE EKKQILYLLG PVGGGKSSLA 
EKLKQLIEKV PFYAIKGSPV FESPLGLFNA SEDGAILEED FGIPRRYLST IMSPWATKRL 
AEFGGDISQF KVVKLYPSVL NQIAVAKTEP GDENNQDISA LVGKVDIRKL EEFPQNDADA 
YSYSGALCRA NQGLMEFVEM FKAPIKVLHP LLTATQEGNY NSTEGLGAIP FTGILLAHSN 
ESEWHSFRNN KKNEAFIDRI YIVKVPYCLR VSDEIKIYDK LLFNSSLAKA HCAPDTLKML 
AQFTTLSRLK EPDNSNIYSK MRVYDGENLK DTDPKAKSIQ EYRDSAGVDE GMNGLSTRFA 
FKILSKVFNF DPHEIAANPV HLLYVLEQQI EQEQFPAETR ERYLRFIKEY LAPRYIEFIG 
KEIQTAYLES YSEYGQNIFD RYVLYADFWI QDQEYRDPET GEILNRVALN EELEKIEKPA 
GISNPKDFRN EIVNFVLRAR ANNNGKNPIW LSYEKLRVVI EKKMFSNTED LLPVISFNAK 
ASKEDQQKHN DFVTRMVERG YTDKQVRLLS EWYLRVRKSQ