Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0538 |
Symbol | dnaG |
ID | 1182148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 590764 |
End bp | 592722 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637391905 |
Product | DNA primase |
Protein accession | NP_790385 |
Protein GI | 28867766 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGGC TGATCCCCCA GAGCTTTATC GACGACCTTC TGAACCGCAC CGACATTGTC GATGTCGTCA GCTCGCGCGT GCAGCTCAAA AAAGCCGGCA AGAACTACAG CGCGTGCTGC CCGTTCCACA AAGAAAAGAC ACCCTCTTTC AGCGTCAGCC CGGACAAACA GTTCTATTAC TGCTTTGGCT GCGGCGCAGG TGGCAACGCA CTGGGCTTCA TCATGGACCA CGACAACCTG GATTTCCCCC AGGCCGTCGA GGACCTTGCC AAAGCCGCCG GCATGGAAGT GCCACGCGAG CAAGGCGTCA AGGGTCAGAA ACCCCGTCAG CCGACCGACT CACCGCTTTA CCCGCTTCTT AACGCTGCCT CCGAGTTTTA CCGCCAGGCA CTAAAAAGCC ATCCGTCGCG CAAAGCCGCA GTGGATTACC TCAAGGGCCG CGGCCTGTCC GGTGAAATCG CCCGGGACTT CGGCCTGGGC TTTGCACCAC CCGGCTGGGA CAACCTGTAC AAGCACCTGA GCAGCGACTC GCTACAGCAA AAGGTCATGA TAGATGCCGG CTTGCTGATC GAAAACGCTG AAACCGGCAA GCGCTACGAC CGCTTCCGTG ACCGGGTGAT GTTTCCGATC CGTGACTCGC GCGGGCGCAT CATCGCCTTC GGCGGTCGCG TATTGGGCGA CGACAAGCCC AAGTACCTGA ACTCGCCGGA AACGCCGGTA TTCCACAAGG GTCAGGAGCT GTACGGGCTG TTTGAAGCAC GCAAATTCAA TCGCAACCTC GATGAAATCA TCGTCGTTGA AGGTTACATG GACGTCATCG CTCTGGCCCA GCAAGGCTTG CGCAATGCCG TGGCCACGCT GGGCACGGCC ACCAGCGAAG AACACTTGAA ACGTTTGTTC AGGGTCGTGC CGAACGTGTT GTTCTGCTTC GACGGCGATC AGGCCGGACG CAACGCCGCA TGGCGAGCGC TGGAGGCCGC GCTGCCAAAC CTGCAGGACG GAAGGCGGGC CCGCTTCCTG TTTCTGCCCG AAGGCGAAGA CCCGGACACG CTGGTGCGCT CGGAAGGCAC CGACGCCTTC AAGGCGCGCA TCAATCAGCA CGCCCAGCCG CTGGCCGATT ATTTTTTCGA GCAACTGACC AAAGAATCCG ACCCGCGCTC ACTGGAAGGC AAAGCGCACA TGGCCACACT CGCCGCGCCA CTGATCGACA AAGTGCCCGG CGCGAACCTG CGGATCCTGA TGCGTCAGCG CCTCAGTGAA ATTACCGGGC TCACCGGCGA GGCCGTCAGC CAACTGGTGC AGAGCGCACC CGCAGACGCG CCTCCGAGCT ACGACCCGTA TGTCGATTAC GACGCCATGC CCGACTTTGC CGATTACCAG CCACAAGGCG GGTACGAGGC GCAGCAGGAA TGGACGCCAA AGAAAGCCGG CGGTCCGAAT CAGAAAAAAT GGGACAACAA CAAGTCCTGG GGCAAGAAAG GCAAGCGTCA GGAGTTCGAA CCCCGCACGC CGCGTGTACC GACCGCCGTC GAGCCGCCAA TGCAGGCCGC ATTGAGAACC TTGCTGCACC ACCCGGAACT GGCCGAAAAG GTCGAAAATG CCAGCCATTT CGCTGCAGAA GACCAATCAA ACGCACAACT GCTGGTCGCC CTTATCGAAG CCCGGCAAAA GAATCCCAGC CTGCGGTCGT TACAGTTGAT AGCGCGATGG CACGGAACTG AACAGGGCCG CTTGCTGCGT GCACTGGCAG AAAAGGAATG GCTGATTGAG ACCGACAACC TTGAACAACA GTTTTTCGAC ACTATAACTA GCTTATCCGC TCGCCAACGC GAGCGCAGCC TGGACCATCT GATCAGCAAG GCTCGGCAGA CCGAGCTGAG CGCAGAAGAG AAAATTCAGC TAAGGGAACT GCTAAATCGC AATGTTCCCG CACAAAACCC GACCTCAACT GGCGCGTGA
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Protein sequence | MAGLIPQSFI DDLLNRTDIV DVVSSRVQLK KAGKNYSACC PFHKEKTPSF SVSPDKQFYY CFGCGAGGNA LGFIMDHDNL DFPQAVEDLA KAAGMEVPRE QGVKGQKPRQ PTDSPLYPLL NAASEFYRQA LKSHPSRKAA VDYLKGRGLS GEIARDFGLG FAPPGWDNLY KHLSSDSLQQ KVMIDAGLLI ENAETGKRYD RFRDRVMFPI RDSRGRIIAF GGRVLGDDKP KYLNSPETPV FHKGQELYGL FEARKFNRNL DEIIVVEGYM DVIALAQQGL RNAVATLGTA TSEEHLKRLF RVVPNVLFCF DGDQAGRNAA WRALEAALPN LQDGRRARFL FLPEGEDPDT LVRSEGTDAF KARINQHAQP LADYFFEQLT KESDPRSLEG KAHMATLAAP LIDKVPGANL RILMRQRLSE ITGLTGEAVS QLVQSAPADA PPSYDPYVDY DAMPDFADYQ PQGGYEAQQE WTPKKAGGPN QKKWDNNKSW GKKGKRQEFE PRTPRVPTAV EPPMQAALRT LLHHPELAEK VENASHFAAE DQSNAQLLVA LIEARQKNPS LRSLQLIARW HGTEQGRLLR ALAEKEWLIE TDNLEQQFFD TITSLSARQR ERSLDHLISK ARQTELSAEE KIQLRELLNR NVPAQNPTST GA
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