Gene PSPTO_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0538 
SymboldnaG 
ID1182148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp590764 
End bp592722 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content60% 
IMG OID637391905 
ProductDNA primase 
Protein accessionNP_790385 
Protein GI28867766 
COG category[L] Replication, recombination and repair 
COG ID[COG0358] DNA primase (bacterial type) 
TIGRFAM ID[TIGR01391] DNA primase, catalytic core 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGGC TGATCCCCCA GAGCTTTATC GACGACCTTC TGAACCGCAC CGACATTGTC 
GATGTCGTCA GCTCGCGCGT GCAGCTCAAA AAAGCCGGCA AGAACTACAG CGCGTGCTGC
CCGTTCCACA AAGAAAAGAC ACCCTCTTTC AGCGTCAGCC CGGACAAACA GTTCTATTAC
TGCTTTGGCT GCGGCGCAGG TGGCAACGCA CTGGGCTTCA TCATGGACCA CGACAACCTG
GATTTCCCCC AGGCCGTCGA GGACCTTGCC AAAGCCGCCG GCATGGAAGT GCCACGCGAG
CAAGGCGTCA AGGGTCAGAA ACCCCGTCAG CCGACCGACT CACCGCTTTA CCCGCTTCTT
AACGCTGCCT CCGAGTTTTA CCGCCAGGCA CTAAAAAGCC ATCCGTCGCG CAAAGCCGCA
GTGGATTACC TCAAGGGCCG CGGCCTGTCC GGTGAAATCG CCCGGGACTT CGGCCTGGGC
TTTGCACCAC CCGGCTGGGA CAACCTGTAC AAGCACCTGA GCAGCGACTC GCTACAGCAA
AAGGTCATGA TAGATGCCGG CTTGCTGATC GAAAACGCTG AAACCGGCAA GCGCTACGAC
CGCTTCCGTG ACCGGGTGAT GTTTCCGATC CGTGACTCGC GCGGGCGCAT CATCGCCTTC
GGCGGTCGCG TATTGGGCGA CGACAAGCCC AAGTACCTGA ACTCGCCGGA AACGCCGGTA
TTCCACAAGG GTCAGGAGCT GTACGGGCTG TTTGAAGCAC GCAAATTCAA TCGCAACCTC
GATGAAATCA TCGTCGTTGA AGGTTACATG GACGTCATCG CTCTGGCCCA GCAAGGCTTG
CGCAATGCCG TGGCCACGCT GGGCACGGCC ACCAGCGAAG AACACTTGAA ACGTTTGTTC
AGGGTCGTGC CGAACGTGTT GTTCTGCTTC GACGGCGATC AGGCCGGACG CAACGCCGCA
TGGCGAGCGC TGGAGGCCGC GCTGCCAAAC CTGCAGGACG GAAGGCGGGC CCGCTTCCTG
TTTCTGCCCG AAGGCGAAGA CCCGGACACG CTGGTGCGCT CGGAAGGCAC CGACGCCTTC
AAGGCGCGCA TCAATCAGCA CGCCCAGCCG CTGGCCGATT ATTTTTTCGA GCAACTGACC
AAAGAATCCG ACCCGCGCTC ACTGGAAGGC AAAGCGCACA TGGCCACACT CGCCGCGCCA
CTGATCGACA AAGTGCCCGG CGCGAACCTG CGGATCCTGA TGCGTCAGCG CCTCAGTGAA
ATTACCGGGC TCACCGGCGA GGCCGTCAGC CAACTGGTGC AGAGCGCACC CGCAGACGCG
CCTCCGAGCT ACGACCCGTA TGTCGATTAC GACGCCATGC CCGACTTTGC CGATTACCAG
CCACAAGGCG GGTACGAGGC GCAGCAGGAA TGGACGCCAA AGAAAGCCGG CGGTCCGAAT
CAGAAAAAAT GGGACAACAA CAAGTCCTGG GGCAAGAAAG GCAAGCGTCA GGAGTTCGAA
CCCCGCACGC CGCGTGTACC GACCGCCGTC GAGCCGCCAA TGCAGGCCGC ATTGAGAACC
TTGCTGCACC ACCCGGAACT GGCCGAAAAG GTCGAAAATG CCAGCCATTT CGCTGCAGAA
GACCAATCAA ACGCACAACT GCTGGTCGCC CTTATCGAAG CCCGGCAAAA GAATCCCAGC
CTGCGGTCGT TACAGTTGAT AGCGCGATGG CACGGAACTG AACAGGGCCG CTTGCTGCGT
GCACTGGCAG AAAAGGAATG GCTGATTGAG ACCGACAACC TTGAACAACA GTTTTTCGAC
ACTATAACTA GCTTATCCGC TCGCCAACGC GAGCGCAGCC TGGACCATCT GATCAGCAAG
GCTCGGCAGA CCGAGCTGAG CGCAGAAGAG AAAATTCAGC TAAGGGAACT GCTAAATCGC
AATGTTCCCG CACAAAACCC GACCTCAACT GGCGCGTGA
 
Protein sequence
MAGLIPQSFI DDLLNRTDIV DVVSSRVQLK KAGKNYSACC PFHKEKTPSF SVSPDKQFYY 
CFGCGAGGNA LGFIMDHDNL DFPQAVEDLA KAAGMEVPRE QGVKGQKPRQ PTDSPLYPLL
NAASEFYRQA LKSHPSRKAA VDYLKGRGLS GEIARDFGLG FAPPGWDNLY KHLSSDSLQQ
KVMIDAGLLI ENAETGKRYD RFRDRVMFPI RDSRGRIIAF GGRVLGDDKP KYLNSPETPV
FHKGQELYGL FEARKFNRNL DEIIVVEGYM DVIALAQQGL RNAVATLGTA TSEEHLKRLF
RVVPNVLFCF DGDQAGRNAA WRALEAALPN LQDGRRARFL FLPEGEDPDT LVRSEGTDAF
KARINQHAQP LADYFFEQLT KESDPRSLEG KAHMATLAAP LIDKVPGANL RILMRQRLSE
ITGLTGEAVS QLVQSAPADA PPSYDPYVDY DAMPDFADYQ PQGGYEAQQE WTPKKAGGPN
QKKWDNNKSW GKKGKRQEFE PRTPRVPTAV EPPMQAALRT LLHHPELAEK VENASHFAAE
DQSNAQLLVA LIEARQKNPS LRSLQLIARW HGTEQGRLLR ALAEKEWLIE TDNLEQQFFD
TITSLSARQR ERSLDHLISK ARQTELSAEE KIQLRELLNR NVPAQNPTST GA