Gene PSPTO_0527 details

Gene Information

• Locus tag: PSPTO_0527
• ID: 1182136
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 575375
• End bp: 577327
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637391894
• Product: hypothetical protein
• Protein accession: NP_790375
• Protein GI: 28867756

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTCG ATCAGTGTTT ATTTGGTTAT GATGACGGGC ATAGGCTACT CGCATCATCG 
CTCCCCTTAG GTACCGAGAC TTCATTTCTT ACCGAGCTTA GCGATTTGGC GCCTGGGACT 
ATTTTCAATC AGTCAGAGGG CTACTGGACT GGTCTTCCAG TACCTGGCAT CAGCCGGTAT 
GTTTTGATGC GTACATGGCC TGCCCCCGAA ATGTCTCGGC CAGGATGTGT ATGGACGCAT 
GCCCTTCTTC TTGAACCCGC GCTCTTCGAA TCGATTGAGG ATTTGTCAGT ATTACAAGCC 
TTCGCGATCC GCCCCAAAGG GCTGGTCGAT AAAGAGCGTT ATCGTGAGCC ACTGACGCAC 
GACGTAAGCC AATTGGTGCA ATCCCCTAAG TCGGTCGACA TCGCAATACT CAAGCGACTC 
CTTCTGTCTC TCTACACTGG AGGCTCTCCG TCGATAGAGG TTGAGTCACC TGGCCAATTG 
GACGCTCCGC TTTTTGCTGT CTGGTCCCAA CAATGGCCGA GACTAAGACG CAACCTTCGC 
TTCCAGACTG CGGCTTCAAG AGCACCGCGC TCTACAGGCT CCATGCGCTT TGACATCACA 
GTAGAACTGG CTCTAACCAT TACAACGCCA TCACGTGATG GCGTGAAGGA TTTGCCTTGG 
CTCGAATCTG CTGCACTTGA TGTTCAAGAG GGAACAGCAG GTACGCTGAG ACCTTTCCTA 
TGGCGCTATG GGCGCGATGT CAGACGCCAG CGCGGTTCGT TTCTCCCGCT GGCAGAAATC 
AAGGCCATCG ACACCGAAGG GACGCATGAT TCAGGCGAAC GTTTGATTGA GATTGTAACC 
ACATCATTTT CGACTTTAGA TGACGCACAG CACCTGAAGC AAGATCTCGT GGATGGCAAT 
CTGGCCCCCG TGGCCCAACC GCAATTGCTA CAACTCGTAC TATCGGGAGC AGGACGCGCT 
GTTTTCCCAA TGCCAACATG CTCCGGCATA TCAAAACTTA TTGATCTGTG GCCAGAGAGG 
CGTAAGGAGA TGCTTTCCCT AATAGAGATC ACTGTGGACG CAGTTGATCC TATAGGCCAA 
TCGGTGTTTG ACCTTCTAAC CCGAGGAACT CAGGAATCGC TGACTTGGCT ACTCACACAA 
GCATCCTCCC AAACTCGTAA ACGGATCATG CGGGAAAACC CGGGGCTTTT GCTTGCAGAT 
TGGTTTCTTG ATCTGGAAAG CCCTGCGGTG ATTGAACTTC TGCCGCTGAT CCCTGAGAAG 
CTTCCCGGAG TTGACGCGCT GTTGGCGAAA TTGCTTATGA GAAACGACCG CACCTTAGCC 
GAGGTGGCGT TCGAGCATTT TCCCATCCTA ATGGCTGGGC AAATCGTATT AGCGGCGGGT 
GGTGCAAGCA CACATGTCGC AGACGTTTGG TGGCAAAAGC TTAGGCAAAA TCCCGCTGTA 
TTATTACAGC CCGAGGTTTT GCGCTTCGTG TCCCGTATGA GCCAGCTTTA CGCAATGGCG 
GAAATATTGG GCTGGCTGAC GCCAAGTGTC GTTGCAGCAG GTCCAGCGTT ATGGGCCCCA 
ATTCTCAGCA AAGCTTCAAA TGATCTCCCC ACAGAGCAAG CGGACACTTT GTATAGCTTC 
CTAGTTGGGA TCGCAATCTC ATCTGGAGAT AGCAGCGGAA TACTCCTAGT CGAAAAGCTG 
TTCGATGTCA TACATGAACA GTTACTCGCA TCAAGGTTGT CCGACTCCGC GCGAGATCTC 
CTTGAAGACC TGCTGCCAGA CGTAGGTTGG ATTCGTAGGT GGGACGTGGC TCTGCGTTTC 
CGTGTAGCAA TAGCAAATGC TTACGTTCGA TTTCGGTGGC CCCCTCAAAG CTACGCCAAG 
TTAGGTAATA CCAGGAGGAT ACGCAGGATG CTTGTAGATG CTGCGTCAGA CGTTCCTGGC 
GGAAAACACT ATGCCGAGGC CGCAGACGAC TGA 

 

Protein sequence

MKFDQCLFGY DDGHRLLASS LPLGTETSFL TELSDLAPGT IFNQSEGYWT GLPVPGISRY 
VLMRTWPAPE MSRPGCVWTH ALLLEPALFE SIEDLSVLQA FAIRPKGLVD KERYREPLTH 
DVSQLVQSPK SVDIAILKRL LLSLYTGGSP SIEVESPGQL DAPLFAVWSQ QWPRLRRNLR 
FQTAASRAPR STGSMRFDIT VELALTITTP SRDGVKDLPW LESAALDVQE GTAGTLRPFL 
WRYGRDVRRQ RGSFLPLAEI KAIDTEGTHD SGERLIEIVT TSFSTLDDAQ HLKQDLVDGN 
LAPVAQPQLL QLVLSGAGRA VFPMPTCSGI SKLIDLWPER RKEMLSLIEI TVDAVDPIGQ 
SVFDLLTRGT QESLTWLLTQ ASSQTRKRIM RENPGLLLAD WFLDLESPAV IELLPLIPEK 
LPGVDALLAK LLMRNDRTLA EVAFEHFPIL MAGQIVLAAG GASTHVADVW WQKLRQNPAV 
LLQPEVLRFV SRMSQLYAMA EILGWLTPSV VAAGPALWAP ILSKASNDLP TEQADTLYSF 
LVGIAISSGD SSGILLVEKL FDVIHEQLLA SRLSDSARDL LEDLLPDVGW IRRWDVALRF 
RVAIANAYVR FRWPPQSYAK LGNTRRIRRM LVDAASDVPG GKHYAEAADD