Gene PSPTO_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0519 
Symbol 
ID1182128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp567763 
End bp568203 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID637391886 
Producttranscriptional regulator, AsnC family 
Protein accessionNP_790367 
Protein GI28867748 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.81189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGATG AAATTGATCA GAAATTGATC GCTGCGCTGC AAATCAACGC ACGCGAAAGC 
GTCGCCATGC TGGCCCGCCA ACTGGGCATC GCCCGCACCA CCGTCACCTC GCGACTTGCA
CGGCTGGAAA GCAGCAAAGT GATCACCGGC TATGGCGTGC GTCTGGCGCA ACGCGTGGTG
AACGGCGGCT TGCAGGCCTA TGTCGGCATC ACCGTACAAC CGCGCTCGGG CAAGGAAGTG
CTACGGCGCT TGAGTGCGAT GGCGCAGGTT CAGCAATTGT GTGCGGTGAG TGGCGAGTTC
GATTATGTCG CCTGGTTGCG CACTGATTCT CCAGAGCAAC TGGACCAGCT TCTTGACCTG
ATTGGCAGCG TGGACGGCGT GGAGAAAACC ACCACGTCGA TCATTCTCAG CAGCAAGATC
GACCGTGGGC AGCCGGTCTG A
 
Protein sequence
MLDEIDQKLI AALQINARES VAMLARQLGI ARTTVTSRLA RLESSKVITG YGVRLAQRVV 
NGGLQAYVGI TVQPRSGKEV LRRLSAMAQV QQLCAVSGEF DYVAWLRTDS PEQLDQLLDL
IGSVDGVEKT TTSIILSSKI DRGQPV