Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0519 |
Symbol | |
ID | 1182128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 567763 |
End bp | 568203 |
Gene Length | 441 bp |
Protein Length | 146 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637391886 |
Product | transcriptional regulator, AsnC family |
Protein accession | NP_790367 |
Protein GI | 28867748 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.81189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCGATG AAATTGATCA GAAATTGATC GCTGCGCTGC AAATCAACGC ACGCGAAAGC GTCGCCATGC TGGCCCGCCA ACTGGGCATC GCCCGCACCA CCGTCACCTC GCGACTTGCA CGGCTGGAAA GCAGCAAAGT GATCACCGGC TATGGCGTGC GTCTGGCGCA ACGCGTGGTG AACGGCGGCT TGCAGGCCTA TGTCGGCATC ACCGTACAAC CGCGCTCGGG CAAGGAAGTG CTACGGCGCT TGAGTGCGAT GGCGCAGGTT CAGCAATTGT GTGCGGTGAG TGGCGAGTTC GATTATGTCG CCTGGTTGCG CACTGATTCT CCAGAGCAAC TGGACCAGCT TCTTGACCTG ATTGGCAGCG TGGACGGCGT GGAGAAAACC ACCACGTCGA TCATTCTCAG CAGCAAGATC GACCGTGGGC AGCCGGTCTG A
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Protein sequence | MLDEIDQKLI AALQINARES VAMLARQLGI ARTTVTSRLA RLESSKVITG YGVRLAQRVV NGGLQAYVGI TVQPRSGKEV LRRLSAMAQV QQLCAVSGEF DYVAWLRTDS PEQLDQLLDL IGSVDGVEKT TTSIILSSKI DRGQPV
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