| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0511 |
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| Symbol | pqqC |
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| ID | 1182120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 559123 |
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| End bp | 559878 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391878 |
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| Product | coenzyme PQQ synthesis protein C |
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| Protein accession | NP_790359 |
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| Protein GI | 28867740 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG5424] Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C |
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| TIGRFAM ID | [TIGR02111] coenzyme PQQ biosynthesis protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGAAG CGACTGCGCT GTCCCCGGCT GAATTCGAGC AGGCCTTACG TGCCAAGGGC
GCCTATTACC ACATCTATCA TCCGTTTCAT GTGGCGATGT ATGAAGGCCG CGCGACCCGC
GAGCAGATTC AGGGCTGGGT CGCCAACCGC TTTTACTATC AGGTGAACAT CCCGCTCAAG
GACGCCGCCA TTCTGGCCAA TTGCCCGGAT CGCGAGATTC GTCGCGAGTG GATTCAGCGC
CTGCTGGACC ACGACGGCGC GCCCGGTGAA GACGGCGGCA TCGAAGCCTG GCTGCGCCTC
GGCGAGGCCG TGGGGCTGGA CCCGGATCAG TTGCGCTCGC AGGAACTGGT ACTGCCCGGT
GTGCGCTTTG CGGTCGATGC CTACGTGAAC TTCGCCCGCC GCGCCAACTG GCAAGAGGCC
GCCAGCAGCT CGCTGACCGA GTTGTTCGCA CCGCAGATTC ATCAATCGCG CCTGGACAGC
TGGCCACAGC ATTACCCGTG GATTGACCCC ACAGGTTACG AGTATTTCCG TACTCGCCTG
GGTCAGGCAC GTCGCGATGT GGAACACGGC CTCGCAATCA CGTTACAGCA CTACACTACG
TATGAAGGCC AGCAGCGCAT GCTGGAAATC CTGCAGTTCA AACTCGACAT TCTGTGGAGC
ATGCTCGATG CCATGTCCAT GGCGTATGAA TTGAACCGCC CCCCGTACCA CAGCGTCACA
GACCAGAAGG TCTGGCATAA GGGGATTACG CCATGA
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| Protein sequence | MSEATALSPA EFEQALRAKG AYYHIYHPFH VAMYEGRATR EQIQGWVANR FYYQVNIPLK
DAAILANCPD REIRREWIQR LLDHDGAPGE DGGIEAWLRL GEAVGLDPDQ LRSQELVLPG
VRFAVDAYVN FARRANWQEA ASSSLTELFA PQIHQSRLDS WPQHYPWIDP TGYEYFRTRL
GQARRDVEHG LAITLQHYTT YEGQQRMLEI LQFKLDILWS MLDAMSMAYE LNRPPYHSVT
DQKVWHKGIT P
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