Gene PSPTO_0498 details

Gene Information

• Locus tag: PSPTO_0498
• Symbol: bioD
• ID: 1182107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 544902
• End bp: 545582
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637391866
• Product: dethiobiotin synthetase
• Protein accession: NP_790347
• Protein GI: 28867728
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0132] Dethiobiotin synthetase
• TIGRFAM ID: [TIGR00347] dethiobiotin synthase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.545472
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAG CCTATTTCAT TACCGGAACC GACACCGACG CCGGCAAGAC CACCGTGGCT 
GCCGGCCTCT TGCATGCCGC CCGCTTGAAG GGTCTGAGCA CAGCGGCAGG CAAGCCTGTG 
GCTTCCGGCT GCGTGATGAC GGCGGAGGGG TTGCGCAACT CCGATGCGCT GGCGTTGCAG 
ACTGAATGTT CCATCGAGCT GGATTACGAT GAGGTCAATC CACTGGCATT CGCCCCCGCC 
ATTGCTCCAC ATCTGGCGGC GCTTGAAGCA GGCGTTACGC TGACTGTCGA TTCACTGCTG 
CAACCGATGC GGCACATTCT GAACAAACAG GCGGATTTCA CCTTGATCGA AGGTGCAGGC 
GGCTGGCGCG TGCCATTGGC CGGGGAACAT AATTTGTCCG ACCTGGCCAT TGCCTTGGGG 
TTGCCGGTGA TTCTGGTGGT GGGCGTGCGC CTGGGCTGTA TCAATCATGC CGTATTGACC 
GCCGAGGCTA TCGCTCGGGA CGGTCTGCAC CTGGCGGGCT GGGTGGCCAA CGTTATCGAC 
GCACAAACCT CTCGGCTGGA GGAAAACCTC GCCACGCTGC GCGAGCGTTT GCCTGCCCCC 
TGTTTGGGGC GCGTGCCACG GCTGAGCGAG GCGAGCGCCG AAAATGTGGC GCATTATCTC 
GACGTGCAGC TGTTGAACTG A 

 

Protein sequence

MSAAYFITGT DTDAGKTTVA AGLLHAARLK GLSTAAGKPV ASGCVMTAEG LRNSDALALQ 
TECSIELDYD EVNPLAFAPA IAPHLAALEA GVTLTVDSLL QPMRHILNKQ ADFTLIEGAG 
GWRVPLAGEH NLSDLAIALG LPVILVVGVR LGCINHAVLT AEAIARDGLH LAGWVANVID 
AQTSRLEENL ATLRERLPAP CLGRVPRLSE ASAENVAHYL DVQLLN