Gene PSPTO_0491 details

Gene Information

• Locus tag: PSPTO_0491
• ID: 1182100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 537253
• End bp: 539169
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637391859
• Product: Tat (twin-arginine translocation) pathway signal sequence domain protein
• Protein accession: NP_790340
• Protein GI: 28867721
• COG category: [R] General function prediction only
• COG ID: [COG3211] Predicted phosphatase
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTAT TAGAAGAAAA TCAAACCACC GATCTGGAAA ACATGGTCGG CGCAAGCAGG 
GCCGGTCTTA CCCGTCGGGG CTTCATCAGC GCGGGCGCAC TGTGTGGCGC AGCGATGTTC 
CTGGGCGGCA ACATCCTGAG CCGCACGGTA CTGGCAAACA GCGTCAGTGC AGCGTCCGGC 
GCATTGCTGG GTTTCGAGAG CATCCCCACC GCCACGGCCG ACAGCATCAG TTTGCCAAAA 
GGGTATACGT CTTCCGTGCT GATCAGTTGG GGCCAACCAT TGCAAGCCAA TGGCCCGGCG 
TTCGACCCGA GCGGCAAGGG CACCGCCCAG GCTCAGGAAG TGCAGTTCGG CGACAACAAC 
GACGGTATGT GCCTGTTCCC GATGCCGGGT CACAAAGACC GCGCGCTGAT GGCGATCAAC 
AACGAATACA CCAATTACCG CTACCTCTTC GATCACGGCA AAGAGCCGCA ATCGGCCGAA 
GAGGTGCAGA AGGCACTCGC CGCCGAAGGC GTGTCGGTAA TCGAAGTCCA GCAGAAGCAA 
GGCAAATGGC AGTTCGTCCA GGACTCACGC TACAACCGTC GCGTGCATGG CAACACGCCA 
ATCAAGCTGA GCGGCCCGGC TGCCGGTCAC GACTGGCTCA AGACCGACGC CGACAAGGGC 
GGCACCCATG CGCTGGGGAC TTTCCAGAAC TGCTCCAGCG GCCAGACGCC GTGGGGCACT 
TACCTGACCT GTGAGGAGAA CTTCACCGAT TGCTTCGGCA GCAGCAACCC GGAGCAGAAA 
TTCGATGCGG GCATGAAGCG CTACGGCGTC GTCGCCGCCA GCAAGGAGAT CAACTGGCAC 
CCGCACGACC CGCGTTTCGA CGTTGCGAAA AACCCCAACG AAGTGAACCG CCACGGCTGG 
GTAGTGGAGA TCGACCCGTT CGACCCCAAG TCCACGCCGG TCAAGCGCAC GGCGCTCGGG 
CGCTTCAAGC ATGAGAACGC GGCGTTCACC CAGACCAAGG GCGGGCGCGC CGTGGTGTAC 
ATGGGCGATG ACGAGCGTGG CGAGTTCATC TACAAGTTCA TCAGCCGCGA CAAGATCGAT 
CACCAGAACC CCAAAGCCAA CCGCGACCTG CTGGACCACG GCACCTTATA CGTGGCGCAG 
TTCGACGCGG GCGACAGCAA CCCGGATCAC CCGAAAGGCA AAGGCCAGTG GATCGAACTG 
ACCCACGGCA AGAATGGCCT GGACGCCGCT GCCAGTTTCA ATAATCAGGC AGAAGTGCTG 
ATTCATGCGC GCCTGGCTGC CAGTGTCGTA AAAGCCACAC GCATGGACCG CCCGGAATGG 
ATAGTGGTGA GCCCCAAGGA CGGCCAGGTG TATTGCACGC TGACCAACAA CATCAAACGT 
GGCGACGAAG GTCAGCCGGT AGGTGGACCG AATCCACGTG CCAAGAACCA GTACGGGCAG 
ATTCTGCGCT GGAGCGAAGA AGGCAGCAAT GCGTCGGCCA TGGCGTTCGA CTGGGACCTG 
TTTGTGGTCG CGGGCAACCC GGCCGTGCAT GCCGGTACGC CGCAGGCCGG GTCGAGCAAT 
ATCAACGCGC AGAACATGTT CAACAGCCCG GACGGCCTGA GCTTCGATGA AGCCGGTCGT 
TTGTGGATTC AGACCGACGG CGACTCCAGC AACAAGGGCG ACTTCGCGGG CATGGGCAAC 
AACCAGATGC TTTGCGCAGA CCCTGCCAGC GGCGAGATTC GCCGCTTTCT GGTCGGCCCG 
GTCGGTTGCG AAATCACCGG CATCAGTTTT GCGCCGGACT ACAAGACGAT GTTCATCGGC 
ATTCAGCACC CTGGCGAAAA CGGCGGTTCC ACCTTCCCCG AGCATTTGCC TAACGGCAAA 
CCGCGCTCAT CGGTGATGGT GATCACCCGC GAAGACGGCG GCGTGATCGG CGCCTGA 

 

Protein sequence

MKLLEENQTT DLENMVGASR AGLTRRGFIS AGALCGAAMF LGGNILSRTV LANSVSAASG 
ALLGFESIPT ATADSISLPK GYTSSVLISW GQPLQANGPA FDPSGKGTAQ AQEVQFGDNN 
DGMCLFPMPG HKDRALMAIN NEYTNYRYLF DHGKEPQSAE EVQKALAAEG VSVIEVQQKQ 
GKWQFVQDSR YNRRVHGNTP IKLSGPAAGH DWLKTDADKG GTHALGTFQN CSSGQTPWGT 
YLTCEENFTD CFGSSNPEQK FDAGMKRYGV VAASKEINWH PHDPRFDVAK NPNEVNRHGW 
VVEIDPFDPK STPVKRTALG RFKHENAAFT QTKGGRAVVY MGDDERGEFI YKFISRDKID 
HQNPKANRDL LDHGTLYVAQ FDAGDSNPDH PKGKGQWIEL THGKNGLDAA ASFNNQAEVL 
IHARLAASVV KATRMDRPEW IVVSPKDGQV YCTLTNNIKR GDEGQPVGGP NPRAKNQYGQ 
ILRWSEEGSN ASAMAFDWDL FVVAGNPAVH AGTPQAGSSN INAQNMFNSP DGLSFDEAGR 
LWIQTDGDSS NKGDFAGMGN NQMLCADPAS GEIRRFLVGP VGCEITGISF APDYKTMFIG 
IQHPGENGGS TFPEHLPNGK PRSSVMVITR EDGGVIGA