| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0489 |
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| Symbol | |
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| ID | 1182098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 535225 |
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| End bp | 536268 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391857 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | NP_790338 |
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| Protein GI | 28867719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAA CCACCATTCG CCTGAAAGGC TGCCGCAAGG CATTTGCCGA CGGCACCGTT
GCTGTACAGG ATTTGCACCT GACCATCGAA CCCGGCGAAA CGCTGGCGAT TCTCGGGCCG
TCCGGTTGTG GCAAGACCAC CACGTTGCGC CTGATTGCCG GGCTTGAGCG GCCGGACGTC
GGGCAGGTGC TGTTCGACGA TCAGGACGTC ACGCGCCTGC CCATCGAGCG GCGTGACGTG
GGCATGGTGT TTCAGAACTA TGCGTTGTTT CCCAATCTCG ATGTGGCCGG GAATATCGTC
TACGGTCTGA AGATTCGCGG CCTGTCGGCT GCCGAGTGCA ACAAGCGTTG TGACGAGTTG
CTGGAACTGG TCGGCCTGAC CGGTCACGGC AATCGTCGCG TCAACGAGCT GTCTGGGGGG
CAACGTCAAC GGGTTGCGCT GGCCCGTGCA CTGGCGCCGC GCCCTCGGGT GCTGTTGCTC
GACGAGCCGT TGGCCGCACT GGACGCGCAG TTGCGCGAGC GCTTGCGCAG CGAGCTGGAT
CAGCTCCTGC GCGGGCTGGG CATCACCTCG GTTTTCGTGA CTCATGATCA GGGCGAAGCG
ATGGCCTTGG GCGACCGGAT TCTGGTGATG GAAAAAGGCT GCGTGTCGCA GTTGGCGACG
CCACGGGAAA TCTATCAGCG GCCCGCCAAT GCTTTTGTCG CAGGGTTTGT CGGCAATCTG
AATGCGTTCA GTGTGGTTGC GCGCACCTCG TCGGGCCTCA CGGTCAGCGG CGGCGAGTTG
CCGTGGAATG GCGCAGACAT GCCGGGCACG GTGTATTGCC GTCCTGAGCA CCTGCGTTTG
GTGCCGGGGC ATGGCCATCT TCAGAGCCAT CTTCAGGGTC GTCTGGTCGG GCAGTTTTTT
CAGGGCGCGC AAAGCCGCTT GCTGGTCGAT GTCGGCGGCC CGCAGCCGCT GTTGGTCGAC
AGCACCGACA ACGTGATTTA CCCCGCCAAC GCCGCCATTG GCCTGAGTGT CGAGCCGCAA
CAACTGTTCA CCCTGCATTC GTGA
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| Protein sequence | MSGTTIRLKG CRKAFADGTV AVQDLHLTIE PGETLAILGP SGCGKTTTLR LIAGLERPDV
GQVLFDDQDV TRLPIERRDV GMVFQNYALF PNLDVAGNIV YGLKIRGLSA AECNKRCDEL
LELVGLTGHG NRRVNELSGG QRQRVALARA LAPRPRVLLL DEPLAALDAQ LRERLRSELD
QLLRGLGITS VFVTHDQGEA MALGDRILVM EKGCVSQLAT PREIYQRPAN AFVAGFVGNL
NAFSVVARTS SGLTVSGGEL PWNGADMPGT VYCRPEHLRL VPGHGHLQSH LQGRLVGQFF
QGAQSRLLVD VGGPQPLLVD STDNVIYPAN AAIGLSVEPQ QLFTLHS
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