| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0480 |
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| Symbol | glcB-1 |
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| ID | 1182089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 525681 |
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| End bp | 527858 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391848 |
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| Product | malate synthase G |
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| Protein accession | NP_790329 |
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| Protein GI | 28867710 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0169498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGT ACGTTCAAGT CGGTGACCTG CAAGTCGCCA GAGTCCTGTT CGACTTCGTG
CAGAACGAAG CAACCCCCGG AACCGGCGTC GATGCGGGCG CATTCTGGGC CGGTGCGGAC
CAACTGATCC ACGACCTCGC GCCAAAGAAC AAGGCACTGC TCGCCCAGCG TGATGAATTG
CAGGCGCAGA TCGATGCCTG GCACCAGTCG CGTGCTGGCC AGGCGCACGA CGCCTCGGCT
TACAAAGCCT TCCTTCAGGA GATCGGCTAT CTGCTGCCAG AAGCGGCGGA CTTTCAGATC
ACCACGCAAA ACGTCGACGA AGAAATTGCC ACCATGGCTG GCCCGCAACT GGTCGTGCCG
GTGATGAACG CACGCTTCGC GCTCAACGCA TCGAATGCAC GCTGGGGCTC GTTGTACGAT
GCGCTCTACG GCACCGATGC AATCAGCGAA GAAGGCGGCG CGGAAAAAGG CAAGGGCTAC
AACAAGGTGC GTGGCGACAA AGTCATCGCC TTCGCCCGCG CCTTTCTTGA TCAGGCTGCG
CCGCTGGCGG CAGGCTCGCA CGTTGACTCG ACTGCTTACA AATTGATCGA CGGCAGACTG
GTCATCAGCC TCAAGGGCGG CAGCAACACC GGCCTGCGCG ACGATGCACA ACTGGTCGGT
TTTCAAGGCG ATGCCTCGGC ACCGTTCGCC GTGCTGTTCA AGCACAACGG TCTGCATTTC
GAATTGCAGA TCGACGCTGC AAGCCCGGTC GGCCAGACCG ATCCGGCAGG CGTGAAAGAC
ATCGTCATGG AAGCCGCGCT GACGACCATC ATGGACTGCG AAGACTCCAT CGCGGCCGTC
GATGCCGACG ACAAAGTGGT CGTTTACCGC AACTGGCTGG GCCTGATGAA AGGTGATCTG
GTTGAATCGG TGTCCAAGGG CGGCGAAACC TTCACCCGCA CCATGAACCC GGACCGGGTC
TACACCACGC CACAAGGTGG CGAAGTCACG CTGCACGGTC GTTCGTTGCT GTTCATCCGC
AACGTCGGCC ACCTGATGAC CATCGACGCG ATTCTCGACA AGCATGGCAA CGAAGTGCCA
GAAGGCATTC TCGATGGCCT GCTGACCAGT CTCGCTGCGA TCCACAACCT CAACGGCAAT
AACACACGCA GCAACAGCCG CAGCGGCTCG ATGTACATCG TCAAACCGAA GATGCACGGG
CCGCAGGAAG CCGCGTTCAC CAACGAGCTG TTCGGGCGTA TCGAGCAGGT ACTGGGCTTG
CCGCGCAACA CGCTGAAAGT CGGCATCATG GACGAGGAGC GCCGTACCAC GGTCAACCTC
AAGGCCTGCA TTCAGGCCGC AAGCGAGCGC GTGGTGTTCA TCAACACCGG CTTTCTGGAC
CGCACCGGTG ACGAAATCCA CACGTCGATG GAAGCAGGCC CGGTGGTGCG CAAGGCGCAG
ATGAAAGCCG AAAAATGGAT CTCGGCCTAC GAGAACTCCA ACGTCGATAT CGGCCTGAAA
TGCGGCCTGC AAGGTCGTGC GCAGATCGGC AAGGGTATGT GGGCCATGCC CGATCTGATG
GCCGCCATGC TGGAGCAGAA AATCGCCCAC CCGCTGGCAG GCGCAAACAC CGCCTGGGTG
CCATCACCCA CCGCGGCTGC GCTGCATGCT CTGCACTATC ACAAGGTGGA TGTGTTCGCT
CGTCAGGCCG AACTGGCCCA GCGCGAACAG GCCTCGGTGG ATGACATCCT GACCATACCG
CTCGCGCTGA ACACCGACTG GACACCGGAA CAAGTCCAGA ACGAACTGGA CAACAACGCC
CAGGGCATTC TTGGCTATGT GGTGCGCTGG ATTGATCAGG GCGTGGGTTG CTCGAAAGTC
CCGGATATCA ACGACATCGG CCTGATGGAA GACCGCGCCA CGCTGCGCAT CTCCAGCCAG
CACATGACCA ACTGGCTGCG GCATGGCATC GTCACCGAAA CGCAGGTACT GGAAAGCCTC
AAACGCATGG CCCCTGTCGT GGACCGCCAG AACGCCAACG ACCCGCTGTA CCGCCCACTT
TCACCAGACT TCGACAGCAA CATCGCCTTC CAGGCGGCCG TCGAACTGGT CATAGAAGGC
ACGCGACAGC CCAACGGCTA CACCGAGCCG GTGCTGCATC GCCGCCGTCG CGAGTTCAAG
GCGAAAAACC GGGTGTAA
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| Protein sequence | MTEYVQVGDL QVARVLFDFV QNEATPGTGV DAGAFWAGAD QLIHDLAPKN KALLAQRDEL
QAQIDAWHQS RAGQAHDASA YKAFLQEIGY LLPEAADFQI TTQNVDEEIA TMAGPQLVVP
VMNARFALNA SNARWGSLYD ALYGTDAISE EGGAEKGKGY NKVRGDKVIA FARAFLDQAA
PLAAGSHVDS TAYKLIDGRL VISLKGGSNT GLRDDAQLVG FQGDASAPFA VLFKHNGLHF
ELQIDAASPV GQTDPAGVKD IVMEAALTTI MDCEDSIAAV DADDKVVVYR NWLGLMKGDL
VESVSKGGET FTRTMNPDRV YTTPQGGEVT LHGRSLLFIR NVGHLMTIDA ILDKHGNEVP
EGILDGLLTS LAAIHNLNGN NTRSNSRSGS MYIVKPKMHG PQEAAFTNEL FGRIEQVLGL
PRNTLKVGIM DEERRTTVNL KACIQAASER VVFINTGFLD RTGDEIHTSM EAGPVVRKAQ
MKAEKWISAY ENSNVDIGLK CGLQGRAQIG KGMWAMPDLM AAMLEQKIAH PLAGANTAWV
PSPTAAALHA LHYHKVDVFA RQAELAQREQ ASVDDILTIP LALNTDWTPE QVQNELDNNA
QGILGYVVRW IDQGVGCSKV PDINDIGLME DRATLRISSQ HMTNWLRHGI VTETQVLESL
KRMAPVVDRQ NANDPLYRPL SPDFDSNIAF QAAVELVIEG TRQPNGYTEP VLHRRRREFK
AKNRV
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