| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0465 |
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| Symbol | |
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| ID | 1182074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 510737 |
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| End bp | 511840 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391833 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | NP_790314 |
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| Protein GI | 28867695 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCGT TCAATCAAGG GGCTCAACCC CAGAACCGCG CGCCACAGTC CATCGGCTTT
CTGCTGTTGG ATAACTTCAC CCTGATCTCC CTCGCATCGG CGGTAGAACC TCTTCGCATG
GCCAACCAGC TGTCGGGCCG CGAGCTGTAT CGCTGGACCA CGCTGAGTGT CGATGGCAGC
CAGGTCTGGG CCAGCGATGG CTTGCAGATC ACCCCGGACG CCGCCATGCA CAAGGCCCAG
GCGCTCGATA CTGTGATTGT CTGCGGTGGT GTCGGCATTC AGCGCACTGT AACCCGTGAG
CATGTCAGTT GGCTGCAGAG CCAGGCGCGT CAGTCGCGTC GCCTGGGTGC TGTGTGCACC
GGCAGTTGGG CGCTGGCGTG CGCCGGTTTG CTCGATGGTT TCGATTGCAG CGTGCATTGG
GAATGCCTGG CTTCAATGCA GGAAGCCTTT CCGCGTGTGT CCATGAGCAC CCGGTTGTTC
ACGCTGGACC GTAACCGCTT CACCAGCTCC GGTGGCACCG CGCCGCTGGA CATGATGCTG
CACCTGATCA GCCGCGATCA TGGCCGTGAG CTGTCGGCGG CGATTTCCGA GATGTTCGTT
TATGAGCGCA TTCGTAACGA GCAGGACCAT CAACGCGTGC CGCTCAAGCA CATGCTGGGC
ACCAATCAGC CGAAATTGCA GGAAATCGTG GCCTTGATGG AGGCCAATCT CGAAGAGCCG
ATCGACCTTG ATGAGCTGGC GGTGTACGTC GCCGTGTCGC GCAGGCAACT GGAGCGGCTG
TTCCAGAAAT ACTTGCACTG CTCGCCGTCG CGTTATTACC TGAAACTGCG CCTGATCCGC
GCCCGGCAAT TGCTCAAGCA GACACCGATG TCGATCATCG AGGTTGCGTC AGTGTGCGGC
TTCGTGTCGA CGCCACACTT CTCCAAATGC TACCGCGAAT ACTTCGGCAT CCCGCCGCGC
GACGAGCGCG TAGGCTCCAA CACCGCGCAA CAGGTCGCCA TGATGCCAAT CCCGCAAGCA
CTGGTGCTCG CGCCGTTGTC GGGACCGCTC TCGGCGTTGA GCCAGGCGCG TAATGAATCG
ACGTTTGCGA GTGTGCGGCT TTAA
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| Protein sequence | MTSFNQGAQP QNRAPQSIGF LLLDNFTLIS LASAVEPLRM ANQLSGRELY RWTTLSVDGS
QVWASDGLQI TPDAAMHKAQ ALDTVIVCGG VGIQRTVTRE HVSWLQSQAR QSRRLGAVCT
GSWALACAGL LDGFDCSVHW ECLASMQEAF PRVSMSTRLF TLDRNRFTSS GGTAPLDMML
HLISRDHGRE LSAAISEMFV YERIRNEQDH QRVPLKHMLG TNQPKLQEIV ALMEANLEEP
IDLDELAVYV AVSRRQLERL FQKYLHCSPS RYYLKLRLIR ARQLLKQTPM SIIEVASVCG
FVSTPHFSKC YREYFGIPPR DERVGSNTAQ QVAMMPIPQA LVLAPLSGPL SALSQARNES
TFASVRL
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