| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0463 |
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| Symbol | |
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| ID | 1182072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 508093 |
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| End bp | 508938 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391831 |
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| Product | glycine/betaine/L-proline ABC transporter, permease protein |
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| Protein accession | NP_790312 |
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| Protein GI | 28867693 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTG ATCAAAAAAT CCCTCTGGGC GAGTACATCG CCGCATTCGT CGACTGGTTG
ACGGCCAACG GCGCCGACTA CTTCGACGCG ATAGCCTCGA CACTGGAAAT GATGATCCAC
GGGTTCACCT TTGCCCTGAC CTGGTTCAAC CCGTTTGTAT TGATCGGCCT TATTGCCGCG
CTCGCGCATT TTATTCAGCG CAAGTGGGGC CTGACCGTTT TCGTCATCCT GTCGTTTCTG
CTGATTCTCA ACCTGCATTA CTGGCAGGAA ACCATGGAAA CCCTCGCGCA GGTGCTGTTC
GCCACTCTGG TCTGCGTCGT CATCGGCGTG CCGCTGGGCA TCATTGCCGC GCACAAGCCG
CTGTTCTACA CAATCATCCG GCCGCTGCTC GACCTGATGC AGACCGTTCC CACCTTCGTT
TACCTGATTC CGACACTGAC GCTGTTCGGT CTGGGCGTGG TGCCCGGGCT GATCTCGACG
GTGGTCTTCG CCATCGCAGC GCCCATACGC TTGACGTACC TGGGCATCCG CGATGTGCCG
CAGGAATTGC TCGACGCCGG CAAGGCCTTT GGCTCGTCGC GCCGCCAGTT GCTGACCCGC
ATCGAACTGC CTTACGCAAT GCCCAGCATC GCCGCCGGGA TTACCCAGTG CATCATGCTG
TCGCTGTCGA TGGTGGTAAT TGCCGCGCTG GTCGGTGCCG ATGGCCTGGG TAAACCGGTG
GTCAACGCAC TGAACACTGC CGACATCGCC CTCGGTTTCG AAGCCGGCCT GGCAATCGTA
TTGCTGGCCA TCATGCTCGA CCGCATCTGC AAACAACCCG AAGCCAAGGT AGGGTCCGAC
GCATGA
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| Protein sequence | MLTDQKIPLG EYIAAFVDWL TANGADYFDA IASTLEMMIH GFTFALTWFN PFVLIGLIAA
LAHFIQRKWG LTVFVILSFL LILNLHYWQE TMETLAQVLF ATLVCVVIGV PLGIIAAHKP
LFYTIIRPLL DLMQTVPTFV YLIPTLTLFG LGVVPGLIST VVFAIAAPIR LTYLGIRDVP
QELLDAGKAF GSSRRQLLTR IELPYAMPSI AAGITQCIML SLSMVVIAAL VGADGLGKPV
VNALNTADIA LGFEAGLAIV LLAIMLDRIC KQPEAKVGSD A
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