| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0461 |
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| Symbol | glyA-1 |
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| ID | 1182070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 505408 |
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| End bp | 506661 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391829 |
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| Product | serine hydroxymethyltransferase |
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| Protein accession | NP_790310 |
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| Protein GI | 28867691 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAGCA AGCAAGACCA GATTCAGGGT TATGACGACG CACTGTTGTC GGCAATGAAC
GCCGAGGAGC AGCGTCAGGA AGACCATATC GAGCTGATCG CCTCGGAGAA CTACACCAGC
AAGCGCGTCA TGCAGGCCCA AGGCAGCGGC CTGACCAACA AATACGCCGA AGGCTATCCC
GGCAAGCGCT ACTACGGCGG TTGCGAGCAC GTCGACAAGG TCGAGCAACT GGCCATCGAA
CGCGCCAGAC AGCTGTTCGG TGCCGATTAC GCCAACGTCC AGCCACACTC CGGCAGCCAG
GCCAACGCGG CGGTCTACCT GGCGCTGCTG CAGGCAGGCG ACACGGTGCT GGGAATGAGC
CTTGCGCACG GCGGCCACCT GACCCACGGT GCCAAAGTCA GTTTCTCGGG CAAGCTGTAC
AACGCCGTGC AGTACGGCAT CGACACCACC ACCGGCCTGA TCGATTACGA CGAAGTCGAA
CGCATCGCCG TCGAATGCCA GCCAAAAATG CTCATTGCCG GTTTCTCGGC CTATTCCAAA
ACGCTGGATT TCCCGCGTTT TCGTGCAATC GCCGACAAGG TGGGTGCCTA CCTGTTCGTC
GACATGGCCC ACGTTGCAGG TCTGGTGGCT GCCGGTCTTT ATCCAAACCC GCTGCCGTAT
GCCGATGTGG TCACCACCAC CACGCACAAG ACACTGCGTG GCCCGCGCGG CGGTCTGATC
CTTGCCAAGG CCAACGAAGA GCTGGAGAAG AAATTCAATT CAGCCGTCTT CCCCGGTGGT
CAGGGCGGCC CGTTGATGCA CGTCATTGCG GCCAAGGCCG TGTGCTTCAA GGAAGCGATG
GAGCCCGGCT TCAAGACGTA TCAGCAGCAG GTCATCGATA ACGCACAAGC GATGGCGCAA
GTCTTCATCA CGCGCGGCTT CGACGTGGTT TCCGGCGGCA CCGACAACCA CCTGTTTCTG
GTCAGCCTGA TCCGTCAGGG CCTGACCGGC AAAGAAGCCG ACGCCGCGCT AGGCCGTGCG
CACATCACCG TCAACAAGAA CTCGGTGCCC AACGACCCGC AGTCGCCATT TGTCACCTCG
GGCCTGCGCA TCGGCACCCC GGCCGTCACC ACTCGCGGTT TCAAGGTCAC CCAGTGCATC
GAACTGGCAG GCTGGATATG CGACATTCTC GACAACCTCG GCGCCGCCGA TGTCGAGGCC
AACGTCGCCA GCCAGGTAGC AGCCCTGTGC GCCGATTTCC CGGTTTATCG CTGA
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| Protein sequence | MFSKQDQIQG YDDALLSAMN AEEQRQEDHI ELIASENYTS KRVMQAQGSG LTNKYAEGYP
GKRYYGGCEH VDKVEQLAIE RARQLFGADY ANVQPHSGSQ ANAAVYLALL QAGDTVLGMS
LAHGGHLTHG AKVSFSGKLY NAVQYGIDTT TGLIDYDEVE RIAVECQPKM LIAGFSAYSK
TLDFPRFRAI ADKVGAYLFV DMAHVAGLVA AGLYPNPLPY ADVVTTTTHK TLRGPRGGLI
LAKANEELEK KFNSAVFPGG QGGPLMHVIA AKAVCFKEAM EPGFKTYQQQ VIDNAQAMAQ
VFITRGFDVV SGGTDNHLFL VSLIRQGLTG KEADAALGRA HITVNKNSVP NDPQSPFVTS
GLRIGTPAVT TRGFKVTQCI ELAGWICDIL DNLGAADVEA NVASQVAALC ADFPVYR
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