| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0456 |
|---|
| Symbol | purU-1 |
|---|
| ID | 1182065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 499114 |
|---|
| End bp | 499971 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637391824 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | NP_790305 |
|---|
| Protein GI | 28867686 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCG CCCCGGACAC GTGGATTCTG ACAGCCGACT GCCCCAGCAT GCTGGGCACA
GTAGACGCGG TGACCCGCTT TCTGTTCGAG CAGGGCTGCT ATGTCACCGA GCACCACTCC
TTCGATGATC GCCTGTCGGG GCGGTTCTTC ATTCGCGTGG AATTTCGTCA GCCTGACGCC
TTCGACGAGC AGGCATTTCG TGAAGGGCTG ACTGAACGCG GCGAGACGTT CGGCATGATC
TTCGAACTCA CAGCGCCCAA CTACAGGCCA AAAGTGGTGA TCATGGTTTC AAAAGCCGAT
CACTGCCTGA ACGACCTGCT CTATCGCCAA CGCATCAACC AGTTGTCAAT GGACGTGGTC
GCGGTGGTGT CCAACCACCC GGATCTCGAA CCGCTCGCTG GCTGGCACGG AATTCCGTAC
TACCATTTCC CTCTGGACCC GAACGACAAG CCTGCGCAGG AAGCCAAGGT CTGGCAGGTG
ATCGAGGAGT CCGGTGCTGA ACTGGTGATC CTCGCCCGCT ACATGCAGGT GCTGTCACCG
GAGCTGTGCC GCAAGCTGGA TGGCAAGGCG ATCAATATCC ATCACTCCTT GCTGCCCGGT
TTCAAAGGCG CCAAACCGTA CCATCAGGCC TACGAAAAAG GCGTGAAACT GGTGGGTGCC
ACGGCGCATT ACATCAACAA CGATCTGGAC GAAGGCCCGA TCATTGCCCA AGGCGTCGAA
GTGGTCGATC ACAGCCACTA CCCCGAAGAC CTGATTGCCA AGGGTCGGGA CATCGAAGGG
CTGACACTGG CCCGCGCGGT GGGTTATCAC ATCGAACGAC GGGTGTTTCT CAACGCCAAC
AGGACGGTGG TTCTGTAG
|
|---|
| Protein sequence | MSRAPDTWIL TADCPSMLGT VDAVTRFLFE QGCYVTEHHS FDDRLSGRFF IRVEFRQPDA
FDEQAFREGL TERGETFGMI FELTAPNYRP KVVIMVSKAD HCLNDLLYRQ RINQLSMDVV
AVVSNHPDLE PLAGWHGIPY YHFPLDPNDK PAQEAKVWQV IEESGAELVI LARYMQVLSP
ELCRKLDGKA INIHHSLLPG FKGAKPYHQA YEKGVKLVGA TAHYINNDLD EGPIIAQGVE
VVDHSHYPED LIAKGRDIEG LTLARAVGYH IERRVFLNAN RTVVL
|
|---|
| |