| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0455 |
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| Symbol | fdhA-1 |
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| ID | 1182064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 497858 |
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| End bp | 499057 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391823 |
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| Product | glutathione-independent formaldehyde dehydrogenase |
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| Protein accession | NP_790304 |
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| Protein GI | 28867685 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGTA ATCGCGGTGT AGTTTATCTC GGCGCTGGCA AGGTCGAAGT GCAATCCATC
CCCTTCCCGA AAATGGAAGA CCCACGCGGC AAGCGCATCG AACATGGCGT CATCCTGCGC
GTTGTTTCCA CCAATATCTG CGGCTCCGAT CAGCACATGG TACGTGGCCG CACGACGGCG
CAAACCGGGC TGGTGCTGGG GCATGAAATC ACCGGCGAAG TGCTGGAAGC CGGTCGCGAT
GTCGAGCATC TCAAGGTCGG TGATCTGGTT TCCGTACCGT TCAACGTGGC GTGCGGTCGT
TGCCGCAGTT GCAAGGAGCA AAACACCGGC GTCTGCCTGA CGGTCAACCC GGCTCGCCCC
GGCGGGGCCT ACGGTTATGT CGATATGGGC GACTGGGTCG GCGGTCAGGC TGAATACGTG
CTGGTGCCTT ACGCAGACTT CAACCTGCTG AAACTCCCGG ACCGCGATGC GGCGATGGAG
AAGATTCGCG ACCTGACCTG CCTGTCCGAC ATCCTGCCCA CCGGCTACCA CGGCGCAGTG
ACCGCAGGCG TTGGCCCTGG CAGCACGGTC TACGTTGCAG GCGCTGGCCC GGTCGGTCTG
GCTGCGGCTG CTTCCGCGCG CTTGTTGGGC GCGGCAGTGG TGATCGTCGG TGACGTCAAC
CCGACCCGCC TGATCCACGC CAAGGCCCAG GGTTTCGAGA TTGCCGACCT GTCTCAGGAC
ACGCCGCTGC ACGAACAGAT CGCTGCCCTG CTTGGCGAAC CGGAAGTCGA CTGCGCCATC
GACGCCGTGG GCTTTGAAGC ACGCGGCCAC GGTCACGCAG GCGCTCAGGC CGAAGCACCT
GCCACCGTGC TCAACTCATT GATGGGCGTG GTGCGTGTAG CAGGCAAGAT CGGCATCCCC
GGCCTGTACG TCACCGAAGA CCCGGGTGCC GTGGACGCCG CCGCAAAAAT GGGCAGTCTG
AGCATCCGCC TTGGCCTGGG CTGGGCCAAA TCCCACAGCT TCCACACCGG CCAGACACCG
GTCATGAAAT ACAACCGCCA ACTGATGCAA GCCATCATGT GGGACCGCAT CAAGATCGCC
GACGTGGTGG GTGTCGAGGT GATCAGCCTG GACGATGCGC CGCGTGGTTA TGGCGAGTTT
GATGCGGGCG TGCCGAAGAA GTTTGTGATT GATCCGCATG GGTTGTTTGG TGGGGTGTAG
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| Protein sequence | MSGNRGVVYL GAGKVEVQSI PFPKMEDPRG KRIEHGVILR VVSTNICGSD QHMVRGRTTA
QTGLVLGHEI TGEVLEAGRD VEHLKVGDLV SVPFNVACGR CRSCKEQNTG VCLTVNPARP
GGAYGYVDMG DWVGGQAEYV LVPYADFNLL KLPDRDAAME KIRDLTCLSD ILPTGYHGAV
TAGVGPGSTV YVAGAGPVGL AAAASARLLG AAVVIVGDVN PTRLIHAKAQ GFEIADLSQD
TPLHEQIAAL LGEPEVDCAI DAVGFEARGH GHAGAQAEAP ATVLNSLMGV VRVAGKIGIP
GLYVTEDPGA VDAAAKMGSL SIRLGLGWAK SHSFHTGQTP VMKYNRQLMQ AIMWDRIKIA
DVVGVEVISL DDAPRGYGEF DAGVPKKFVI DPHGLFGGV
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