Gene PSPTO_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0450 
Symbol 
ID1182059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp493574 
End bp494353 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID637391818 
ProductISPsy8, transposase OrfB 
Protein accessionNP_790299 
Protein GI28867680 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCGCA GTACGTTCTA CTATCAGGTT CAGGTGCAAT CCAGACCCGA TCCAGATGCT 
GCTCTAAAGC AGGAGGTAGA GCGGATTTAT CACGAGGAGA GAGGTCTTTA TGGGGCTCGG
CGCATCACAG CGGTTATCCG CAACTCAGGC ACGCTGGTCA ACAAGAAGGT TGTGGAGAGA
TTGATGGCTG AACTGGGTCT GCGCTCCGTT GTTCGACCAA AAAAATACCG TTCCTATAAG
GGCACCGTCG GAAAAATTGC ACCGAATTTG CTGGAGCGCA ATTTCACGGC GCAACGCCCG
AACCAGAAAT GGGTGACCGA TGTGACCGAG TTTAAAGTGG CCAATCGAAA GCTGTATCTC
TCGCCTGTGA TGGACCTGTA CAACGGTGAG ATCGTGGCGT ACGAATTGTC TACCAGGCCG
TGCTTTGAGC TGGTCACCAG TATGCTGGAC AAGGCGTTGC AGCAGTTGCA AGACGAGCCG
AAGCTTGTGA TGCACTCGGA TCAAGGCTGG CAGTATCAAC ACGCGCAGTA CCGTCAGAAA
CTGGCGGCAA AGGGTGTGAA GCAAAGCATG TCTCGTAAGG GAAATTGCCT GGACAACGCT
GCGATGGAAA GCTTTTTTGG TACGCTTAAG TCCGAGTTTT TCTACTTGAA ACGATTTGAA
AGCATAGAAG AGCTGACGGC AGGTCTGGAG GAGTACATCC GCTACTACAA CCATGACCGC
ATTAAGCTGA AGCTAGGCGG CCTGAGCCCC GTAAAATACA GGACTCAGGC GGCAAGCTAA
 
Protein sequence
MARSTFYYQV QVQSRPDPDA ALKQEVERIY HEERGLYGAR RITAVIRNSG TLVNKKVVER 
LMAELGLRSV VRPKKYRSYK GTVGKIAPNL LERNFTAQRP NQKWVTDVTE FKVANRKLYL
SPVMDLYNGE IVAYELSTRP CFELVTSMLD KALQQLQDEP KLVMHSDQGW QYQHAQYRQK
LAAKGVKQSM SRKGNCLDNA AMESFFGTLK SEFFYLKRFE SIEELTAGLE EYIRYYNHDR
IKLKLGGLSP VKYRTQAAS