| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0441 |
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| Symbol | betB |
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| ID | 1182050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 485655 |
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| End bp | 487127 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391809 |
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| Product | betaine aldehyde dehydrogenase BADH |
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| Protein accession | NP_790290 |
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| Protein GI | 28867671 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.558402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCGTT TTGAATTGCA AAAACTCTAC ATCGACGGCG GTTATGTCGA TGCCAGCAAC
ACTGAAACCT TCGACTCGAT CAACCCTGCG AACGGCGAAG TTCTGGCTAA GATCCAGCGC
GCCAGCAAGG AAGACGTCGA GCGTGCGGTG GTCGCCGCCG AGAAGGGCCA GAAGATCTGG
GCCGCAATGA CTGCAGTCGA GCGTTCGCGC ATCCTGCGTC GTGCCGTCGA TATCCTGCGT
GAGCGCAACG ATGAGCTGGC CGCGCTCGAA ACGCTGGACA CCGGTAAAGC CATTTCCGAA
ACCCGTTACG TTGACATCGT GACCGGCGCC GACGTGCTGG AATACTACGC AGGCCTGGTG
CCTGCCATCG AAGGCGAGCA GATTCCGCTG CGTGATTCGT CCTTCGTCTA CACCCGCCGC
GAGCCGCTGG GTGTGGTCGC CGGTATCGGT GCTTGGAACT ACCCGATCCA GATCGCCTTG
TGGAAGTCCG CCCCGGCATT GGCTGCGGGC AACGCGATGA TCTTCAAGCC GAGCGAAGTC
ACCTCGCTGA CCACCCTGAA GCTGGCAGAA ATCTACACCG AAGCCGGCGT GCCGAACGGC
GTGTTCAACG TGTTGACTGG CAGCGGCCGT GAAGTCGGCA CCTGGATCAC CGAGCACCCG
CGCATCGAGA AAGTCTCCTT CACCGGCGGC ACCGACACCG GCAAGAAAGT CATGGCCAGT
GCGTCGAGTT CGTCGCTCAA GGAAGTGACG ATGGAGCTGG GCGGCAAGTC GCCGCTGATC
GTTTTCGACG ACGCCGACCT GGATCGCGCC GCCGACATCG CCATGATGGC CAACTTCTAC
AGCTCCGGTC AGGTCTGCAC CAACGGTACG CGCGTGTTCG TACCGAATGC CCTGAAAGGC
GAGTTCGAAG CGAAAATCCT GGAGCGTGTG AAGCGTATTC GTCCCGGCAA CCCGGAAGAC
GAAAACATCA ATTTCGGTCC GCTGGTCAGC TTTGAACACA TGGAAAGCGT GCTGGGCTAC
ATCGCCAAGG GCAAAGAGCA GGGCGCACGC CTGTTGTGCG GCGGCGACCG TTTGACCGGT
GGCGTTTTCG ACAAGGGCGC GTTCGTGGCT GCAACCGTGT TCACCGACTG CACCGACGAG
ATGACCATCG TGCGCGAAGA GATCTTCGGC CCGGTGATGA GCATTCTTGG TTACGACACC
GAGGACGAAG TGGTGCGCCG CGCCAACGAC ACCGACTTCG GCCTGGCTGC GGGCATCGTG
ACCCGTGACC TGAACCGCGC GCACCGCGTG ATTCACTTGC TGGAAGCCGG TATCTGCTGG
ATCAACGCGT GGGGCGAGTC GGCGGCGCAA ATGCCGGTCG GCGGTTACAA GCAGTCGGGC
GTCGGTCGTG AAAACGGCAT CAGCTCGCTG GCCCAGTACA CGCGCATCAA GTCGGTTCAG
ATCGAGTTGG GCGACTACGC CTCGGTGTTC TAA
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| Protein sequence | MARFELQKLY IDGGYVDASN TETFDSINPA NGEVLAKIQR ASKEDVERAV VAAEKGQKIW
AAMTAVERSR ILRRAVDILR ERNDELAALE TLDTGKAISE TRYVDIVTGA DVLEYYAGLV
PAIEGEQIPL RDSSFVYTRR EPLGVVAGIG AWNYPIQIAL WKSAPALAAG NAMIFKPSEV
TSLTTLKLAE IYTEAGVPNG VFNVLTGSGR EVGTWITEHP RIEKVSFTGG TDTGKKVMAS
ASSSSLKEVT MELGGKSPLI VFDDADLDRA ADIAMMANFY SSGQVCTNGT RVFVPNALKG
EFEAKILERV KRIRPGNPED ENINFGPLVS FEHMESVLGY IAKGKEQGAR LLCGGDRLTG
GVFDKGAFVA ATVFTDCTDE MTIVREEIFG PVMSILGYDT EDEVVRRAND TDFGLAAGIV
TRDLNRAHRV IHLLEAGICW INAWGESAAQ MPVGGYKQSG VGRENGISSL AQYTRIKSVQ
IELGDYASVF
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