| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0427 |
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| Symbol | ftsY |
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| ID | 1182036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 472419 |
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| End bp | 473960 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391795 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | NP_790276 |
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| Protein GI | 28867657 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGTT CCAGCGACGA CAAGAAGACC CCAGCTGCGG CTGGTGAGAA GAAAGGCCTG
TTCGGATGGC TGCGCAAGAA GCCGCAGCAA GAAGCCGAAC CAACGCCGCC AGAATCATCG
CCGGCGCAAC CCGAACCGGT CATCGATCAG GTTATAAAGA CCCCCCTGGT CGAGCCATCT
GCTGCCCCGC AACCTGCGCC CGAGAGCATC CCCCAGGCGG ATGCGCCTGC CCCGCAGATC
AATGTAGAGC CGGGCGCGCC GTCACCTCAG CCCTGGCTGA CCTTGCCGGT CAACGAAGAG
TCGGTGGCGC TGAGTGATGA GCGCGAGCCG CACGTAACCC CGGCGATTCC GCTACAGGGT
CATGTTCATG TCGTGCCTGA GCCGGTGGTG TCCGAACCTG TCGCCTATGA GCCGCAAGCC
GAACCTGTAG CCGATATCCT GCCGCTCAGC GCTCAAGAGT CGGTATTGGT TGAGCCTGCT
GCAGAACCTG CTCCTGAACC TGAACCTGTC GCGGCCCAGC CCGTCCTTCA GCCAGTGCAG
CCTGCTCAGA CAGTGGTTCC GATCATAGCG CCAGCAGCAC CGGCACCTGT GCCAGAGGCA
GAAGCCGGCA AGGTCGGTTT CTTCGCTCGC CTCAAGCAGG GCCTGTCGAA GACCAGCGCC
AGCATCGGCG AAGGCATGGC CAGCCTGTTT CTGGGCAAGA AAGCCATTGA TGATGACCTG
CTGGAAGAAA TCGAAACCCG TCTGCTGACC GCAGATGTCG GCGTCGAGGC CACGTCAGTC
ATCATCAAGA GCCTGACCCA GAAAGTCGCG CGCAAGCAGT TGACCGACGC TCAAGCGTTG
TACACCTCGC TGCAGGGTGA GCTGGCAGCG ATGCTCAAGC CGGTCGAGCA ACCGCTGGTG
ATCAAGGCCG AGCACAAGCC CTTCGTGATT CTGGTGGTAG GCGTCAATGG CGCAGGCAAG
ACCACGACTA TCGGCAAACT GGCCAAGAAG CTGCAACTGG AAGGCAAGAA AGTCATGCTG
GCGGCGGGTG ACACCTTCCG CGCTGCCGCT GTCGAACAAT TGCAGGTCTG GGGCGAGCGT
AACCACATTC CGGTCATCGC CCAGCACACC GGCGCCGATT CCGCCTCGGT GATCTTCGAT
GCCGTGCAGG CCGCCAAGGC CCGTGGCATT GATGTGCTGA TTGCCGACAC TGCCGGGCGT
CTGCATACCA AGGACAACCT GATGGAGGAG TTGAAGAAGG TTCGCCGTGT GATCGGTAAA
CTCGACGCCG ACGCTCCCCA TGAAGTCCTG CTGGTACTCG ACGCTGGTAC TGGTCAGAAC
GCCATCAATC AGGCCAAACA ATTCAACCAG ACGGTCACCC TGACCGGGCT GGCACTTACT
AAACTGGATG GCACAGCCAA GGGCGGCGTG ATTTTCGCCC TGGCCAAGCA GTTCGGCCTG
CCTATTCGCT ATATCGGCGT GGGCGAGGGC ATTGATGATC TGCGTACCTT CGAGGCCGAA
CCCTTTGTTC AGGCTCTGTT TGCGGAGCGG GAGCGTCCAT GA
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| Protein sequence | MFGSSDDKKT PAAAGEKKGL FGWLRKKPQQ EAEPTPPESS PAQPEPVIDQ VIKTPLVEPS
AAPQPAPESI PQADAPAPQI NVEPGAPSPQ PWLTLPVNEE SVALSDEREP HVTPAIPLQG
HVHVVPEPVV SEPVAYEPQA EPVADILPLS AQESVLVEPA AEPAPEPEPV AAQPVLQPVQ
PAQTVVPIIA PAAPAPVPEA EAGKVGFFAR LKQGLSKTSA SIGEGMASLF LGKKAIDDDL
LEEIETRLLT ADVGVEATSV IIKSLTQKVA RKQLTDAQAL YTSLQGELAA MLKPVEQPLV
IKAEHKPFVI LVVGVNGAGK TTTIGKLAKK LQLEGKKVML AAGDTFRAAA VEQLQVWGER
NHIPVIAQHT GADSASVIFD AVQAAKARGI DVLIADTAGR LHTKDNLMEE LKKVRRVIGK
LDADAPHEVL LVLDAGTGQN AINQAKQFNQ TVTLTGLALT KLDGTAKGGV IFALAKQFGL
PIRYIGVGEG IDDLRTFEAE PFVQALFAER ERP
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